Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ZNF259P1-202ENST00000572422 4912 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC010478.1-201ENST00000601500 6762 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 Y_RNA.239-201ENST00000364444 113 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SNORA70.7-201ENST00000384159 133 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MIR325-201ENST00000385260 98 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MIR1302-7-201ENST00000408841 72 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RNA5SP203-201ENST00000410451 136 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 LYPLA2P3-201ENST00000417429 576 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RPS27P16-201ENST00000425758 201 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RPL36P2-201ENST00000426026 315 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC015922.2-201ENST00000435593 184 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 HMGN2P10-201ENST00000448085 265 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 TMEM97P1-201ENST00000452969 451 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 snoU13.14-201ENST00000459372 104 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SL554P-201ENST00000468197 292 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SL401P-201ENST00000470065 298 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SL659P-201ENST00000483093 299 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC114300.1-201ENST00000502347 280 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 GUSBP3-201ENST00000509348 423 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC138866.1-201ENST00000514522 497 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RNA5SP459-201ENST00000516628 100 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AL591767.3-201ENST00000554632 525 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC006349.1-201ENST00000555526 235 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC090897.1-201ENST00000580909 226 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MIR4433B-201ENST00000581329 102 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MIR548V-201ENST00000584165 80 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SL575P-201ENST00000620774 299 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 MIR4773-1-201ENST00000637203 78 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 OR9K1P-202ENST00000641111 3217 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 AC107027.3-201ENST00000565095 3473 ntBASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP9-4Q9BYQ2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms