Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC022164.1-201ENST00000568767 2673 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 Z95114.1-201ENST00000624264 14574 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 Y_RNA.272-201ENST00000364696 102 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 SNORD20-201ENST00000384550 80 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 Y_RNA.568-201ENST00000384742 113 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 MIR188-201ENST00000385034 86 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 AL162725.1-201ENST00000435405 301 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 GEMIN8P3-201ENST00000445417 720 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC091959.1-201ENST00000495857 238 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 RNA5SP418-201ENST00000515951 117 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 AL049539.1-201ENST00000611964 459 ntBASIC5.63□□□□□ -1.51
USB1Q9BQ65 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USB1Q9BQ65 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.63□□□□□ -1.51
USB1Q9BQ65 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 PHKBP1-201ENST00000450951 1951 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 RNU6-879P-201ENST00000364328 108 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 RNU6-318P-201ENST00000384283 103 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 DUTP5-201ENST00000406790 469 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 GNG5P5-201ENST00000420444 220 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 RPS26P47-201ENST00000427219 348 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 RPL7L1P9-201ENST00000431298 745 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 RN7SL326P-201ENST00000477493 296 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC022206.1-201ENST00000495947 347 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 HMGB3P16-201ENST00000508037 287 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 SNORA27.4-201ENST00000516650 95 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 IGHV1-14-201ENST00000523391 241 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 AK6P2-201ENST00000549020 471 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC097467.4-201ENST00000605504 141 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.62□□□□□ -1.51
USB1Q9BQ65 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.62□□□□□ -1.51
USB1Q9BQ65 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USB1Q9BQ65 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 RNU1-65P-201ENST00000363919 148 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RN7SKP81-201ENST00000365603 331 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 Y_RNA.488-201ENST00000384403 102 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RNU6-843P-201ENST00000384454 104 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 MIR10A-201ENST00000385043 110 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RPS4XP3-201ENST00000398541 413 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 RNU5E-9P-201ENST00000411164 104 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms