Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC024082.2-201ENST00000434771 238 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 MTATP6P13-201ENST00000438531 667 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS1Q99742 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 TPT1P12-201ENST00000448968 492 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC140076.1-201ENST00000449897 361 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 PSPHP1-201ENST00000450062 261 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL359385.1-201ENST00000456509 365 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RPL36AP13-201ENST00000457490 317 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC108078.1-201ENST00000508073 725 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC091133.4-201ENST00000511142 308 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RNU2-10P-201ENST00000516375 211 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RNU6-445P-201ENST00000516949 107 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RNU6-64P-201ENST00000517119 105 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS1Q99742 FAM60DP-201ENST00000524174 632 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS1Q99742 OR5G4P-201ENST00000525251 760 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 FAM92A1P1-201ENST00000528023 890 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 TOMM20P2-201ENST00000540082 421 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC123904.3-201ENST00000547218 814 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC128657.1-201ENST00000549459 145 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC027807.1-201ENST00000559921 996 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.76□□□□□ -1.81
NPAS1Q99742 MIR3167-201ENST00000579623 85 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AP001330.4-201ENST00000604350 154 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL591034.3-201ENST00000605511 685 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AF250324.2-201ENST00000608299 610 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC092794.1-201ENST00000612734 582 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL713922.2-201ENST00000619384 716 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 CR381653.2-201ENST00000624041 768 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC124864.2-201ENST00000624736 186 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AC112200.1-201ENST00000625015 234 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS1Q99742 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NPAS1Q99742 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC092326.2-201ENST00000624772 1561 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AL645937.1-201ENST00000641739 1652 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS1Q99742 SNORD56.2-201ENST00000363242 71 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 RNA5SP130-201ENST00000364431 114 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 RNU6-282P-201ENST00000365357 103 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 MIR1179-201ENST00000408703 91 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 RPL23AP89-201ENST00000439324 255 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.75□□□□□ -1.81
NPAS1Q99742 RNA5SP246-201ENST00000458909 119 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 RN7SL385P-201ENST00000468873 276 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 RPL7P19-201ENST00000469948 618 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AC007537.2-201ENST00000472093 511 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC079382.1-201ENST00000493346 557 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 GMPSP1-201ENST00000514075 579 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS1Q99742 RN7SKP244-201ENST00000516513 307 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AC022616.3-201ENST00000523940 148 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NPAS1Q99742 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC063950.1-201ENST00000552036 308 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS1Q99742 SUB1P2-201ENST00000556401 297 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AL136363.1-201ENST00000605349 337 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AC012603.1-201ENST00000606424 528 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 TUG1_2.1-201ENST00000614234 87 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 FRG1KP-201ENST00000623592 341 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 AC091905.1-201ENST00000624400 311 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.75□□□□□ -1.81
NPAS1Q99742 AC116667.1-201ENST00000604855 2072 ntBASIC3.75□□□□□ -1.81
NPAS1Q99742 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS1Q99742 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NPAS1Q99742 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 Y_RNA.1-201ENST00000352915 104 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NPAS1Q99742 RNU6-600P-201ENST00000362524 99 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RNU4-1-201ENST00000363925 141 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms