Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 AL353796.1-201ENST00000561542 3241 ntBASIC6.13□□□□□ -1.43
TRIM47Q96LD4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 AC245100.2-201ENST00000454544 1679 ntBASIC6.13□□□□□ -1.43
TRIM47Q96LD4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 PROS2P-201ENST00000474651 1951 ntBASIC6.13□□□□□ -1.43
TRIM47Q96LD4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM47Q96LD4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RNU6-1287P-201ENST00000362914 107 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RNU6-1303P-201ENST00000364841 107 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RNU6-1060P-201ENST00000384664 107 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 EIF4EP2-201ENST00000422816 654 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RPL21P71-201ENST00000465598 459 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 DYNLL1P5-201ENST00000467158 270 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AP000797.2-201ENST00000475768 606 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AL359219.2-201ENST00000555184 348 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 LARP7P2-201ENST00000575306 125 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 MIR4270-201ENST00000581799 70 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 MIR3941-201ENST00000582572 103 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 RPS29P30-201ENST00000600975 111 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AC090740.1-201ENST00000623193 2262 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AL078621.3-201ENST00000623707 2042 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 AP001029.2-203ENST00000589795 4910 ntBASIC6.12□□□□□ -1.43
TRIM47Q96LD4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM47Q96LD4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AL161781.1-201ENST00000354277 403 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU6-1255P-201ENST00000363434 112 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 SNORA23-201ENST00000365128 182 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU6-47P-201ENST00000383866 107 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RN7SKP235-201ENST00000410662 305 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU6-130P-201ENST00000411112 103 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 GPS2P1-201ENST00000411761 986 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RPL7P46-201ENST00000425129 740 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RPL12P17-201ENST00000432393 498 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AL031274.1-201ENST00000450334 232 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU7-169P-201ENST00000459456 61 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RPL23AP12-201ENST00000467573 473 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC097484.1-201ENST00000471148 389 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 YWHAEP4-201ENST00000505390 198 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 RNU6-1069P-201ENST00000516612 133 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC034114.1-201ENST00000520293 285 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC083809.1-201ENST00000615051 472 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC091895.1-201ENST00000624494 256 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 CDC27P2-201ENST00000425026 1922 ntBASIC6.11□□□□□ -1.43
TRIM47Q96LD4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRIM47Q96LD4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SAMMSON-226ENST00000642089 1582 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 snoU2_19.2-201ENST00000363024 80 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RNU6-984P-201ENST00000363236 109 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 Y_RNA.273-201ENST00000364703 102 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RNA5SP505-201ENST00000364748 108 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 Y_RNA.383-201ENST00000383855 97 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 MIR600-201ENST00000385007 98 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 MIR105-1-201ENST00000385222 81 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SNORA53-201ENST00000391141 249 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RNU6-394P-201ENST00000410735 107 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RNU6-293P-201ENST00000411259 106 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AL353997.1-201ENST00000432936 108 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms