Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU5E-4P-201ENST00000364931 120 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 Y_RNA.303-201ENST00000364998 94 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 RNU6-1060P-201ENST00000384664 107 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 SNORA48.7-201ENST00000391302 135 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 EIF4HP2-201ENST00000424380 563 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 MTND3P10-201ENST00000450967 341 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AP000873.1-201ENST00000463987 400 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 RPL7P19-201ENST00000469948 618 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 RPL21P129-201ENST00000491732 478 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC018710.1-201ENST00000506509 158 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC104806.1-201ENST00000508720 308 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC026402.1-201ENST00000513642 170 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 SNORA31.9-201ENST00000516429 84 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 MRPL49P2-201ENST00000521066 465 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 MED28P6-201ENST00000558776 231 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 RPL23AP84-201ENST00000571193 464 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 MIR4775-201ENST00000581168 75 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC005730.3-201ENST00000583067 366 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC130324.3-201ENST00000614165 542 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AL355810.1-201ENST00000614629 552 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC006065.6-201ENST00000625201 545 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 API5P2-201ENST00000397055 1498 ntBASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNPOQ8N3V7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNPOQ8N3V7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNPOQ8N3V7 LINC01109-201ENST00000603837 3081 ntBASIC4.65□□□□□ -1.66
SYNPOQ8N3V7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNPOQ8N3V7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 Y_RNA.160-201ENST00000363677 92 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RNU6-288P-201ENST00000363690 104 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RNA5SP366-201ENST00000365454 123 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 SNORA36C-201ENST00000384289 132 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 HSPE1P8-201ENST00000406997 288 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RN7SKP140-201ENST00000411196 284 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RPL30P16-201ENST00000419341 429 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 HMGB1P27-201ENST00000431429 603 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 MTND4P25-201ENST00000441039 533 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AL445433.1-201ENST00000457507 257 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 GMFBP1-201ENST00000467831 427 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 UQCRHP4-201ENST00000471686 272 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RN7SKP46-201ENST00000515942 234 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AP003730.1-201ENST00000524605 285 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 OR5B19P-201ENST00000531766 928 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 BDH2P1-201ENST00000602288 736 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AL670379.4-201ENST00000605279 254 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 AP002826.1-201ENST00000608835 315 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 MIR3653-201ENST00000625572 110 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 MTND4P14-201ENST00000435799 1354 ntBASIC4.65□□□□□ -1.67
SYNPOQ8N3V7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 DEFB108F-201ENST00000344638 222 ntBASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
SYNPOQ8N3V7 RNU6-451P-201ENST00000362921 107 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms