Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CYP4A43P-201ENST00000568156 121 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC060771.1-201ENST00000582031 164 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC007363.1-201ENST00000604736 620 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC004853.1-201ENST00000604902 698 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AL356585.4-201ENST00000623078 1229 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 MAPK10-372ENST00000641954 3413 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RNY4P16-201ENST00000364768 94 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RNU6-359P-201ENST00000365466 108 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 U3.20-201ENST00000390909 217 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LAP3P1-201ENST00000403648 294 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 HSPE1P12-201ENST00000412576 301 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC006548.1-201ENST00000427470 102 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 OR51AB1P-201ENST00000429046 620 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC007389.2-201ENST00000434630 306 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC108734.1-201ENST00000439549 399 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 USP9YP15-201ENST00000442391 422 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC006011.1-201ENST00000442758 349 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RPL23AP20-201ENST00000447965 421 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 MTND5P20-201ENST00000448677 143 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AP000926.1-201ENST00000479573 241 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC021382.1-201ENST00000483523 359 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC023194.1-201ENST00000493084 308 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC108145.1-201ENST00000503770 153 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC098799.2-201ENST00000509466 868 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC005798.1-201ENST00000513715 387 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 HIGD1AP3-201ENST00000515857 278 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 Vault.1-201ENST00000516474 102 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RNU6-358P-201ENST00000516564 75 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AP003034.1-201ENST00000534621 422 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL512310.1-201ENST00000548639 172 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC063950.1-201ENST00000552036 308 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 MIR5684-201ENST00000585074 65 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL606490.9-201ENST00000603331 271 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC012507.3-201ENST00000603556 477 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL009028.1-201ENST00000604895 802 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 MIR7702-201ENST00000621931 59 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AP005264.7-201ENST00000625003 745 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 CR381572.1-201ENST00000625098 102 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 CASC19-280ENST00000642102 1351 ntBASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
C9orf139Q6ZV77 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.70-201ENST00000362886 110 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RNVU1-3-201ENST00000364313 161 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 RNU1-39P-201ENST00000383897 165 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 SNORA20.2-201ENST00000383922 131 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 MT-TL1-201ENST00000386347 75 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 CYCSP19-201ENST00000411715 316 ntBASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf139Q6ZV77 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms