Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
TNFRSF17Q02223 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TNFRSF17Q02223 snoZ40.1-201ENST00000364540 72 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC245054.2-201ENST00000415639 319 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 OR2AS1P-201ENST00000427827 319 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 SETP8-201ENST00000435341 628 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC090774.1-201ENST00000435925 246 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 GTF2IP7-202ENST00000436677 309 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 RPL26P6-201ENST00000440913 438 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC009237.8-201ENST00000445492 379 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC234775.1-201ENST00000454247 670 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 RNU6-798P-201ENST00000516912 103 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC087808.1-201ENST00000520501 361 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC022861.1-201ENST00000522981 663 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 YWHAZP1-201ENST00000556286 722 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AADACP1-206ENST00000561502 1193 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC010653.1-201ENST00000571108 881 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC069545.1-201ENST00000605671 358 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 MIR6130-201ENST00000619419 109 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 CDR1-202ENST00000625883 1485 ntBASIC2.9□□□□□ -1.95
TNFRSF17Q02223 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
TNFRSF17Q02223 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RNU5A-1-201ENST00000362698 116 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RNU6-1257P-201ENST00000384625 110 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RPS3AP24-201ENST00000407896 734 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RPL7L1P10-201ENST00000427790 463 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AL512649.1-201ENST00000428997 581 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 LSM1P1-201ENST00000438629 273 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 SDAD1P2-201ENST00000441308 2028 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 GAPDHP27-201ENST00000447427 1020 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RPS3AP43-201ENST00000479743 781 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC108734.3-201ENST00000481241 1165 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC091163.3-201ENST00000518269 1144 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 HMGB1P6-201ENST00000569046 646 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 BNIP3P27-201ENST00000599991 412 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC019159.1-201ENST00000605094 187 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AL158050.2-201ENST00000605336 568 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 PART1_2.1-201ENST00000612397 250 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC123767.1-202ENST00000620407 817 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AL049777.1-201ENST00000622740 518 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC104985.3-201ENST00000623479 597 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC110079.1-202ENST00000635213 138 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AC109315.1-201ENST00000584143 1347 ntBASIC2.89□□□□□ -1.95
TNFRSF17Q02223 AP000526.1-201ENST00000603308 1388 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 AC012321.1-201ENST00000561622 1588 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFRSF17Q02223 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF17Q02223 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF17Q02223 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 RNU6-198P-201ENST00000384258 104 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 SNORA54-201ENST00000384281 123 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 SNORD116-12-201ENST00000384468 92 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 AL450338.1-201ENST00000407987 512 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
TNFRSF17Q02223 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms