Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.79□□□□□ -1.48
RFX1P22670 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFX1P22670 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.79□□□□□ -1.48
RFX1P22670 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFX1P22670 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.78□□□□□ -1.48
RFX1P22670 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RFX1P22670 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFX1P22670 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 SNORA67-201ENST00000384423 137 ntBASIC5.78□□□□□ -1.48
RFX1P22670 RNU6-1105P-201ENST00000384774 107 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.78□□□□□ -1.48
RFX1P22670 AL358176.2-201ENST00000425769 204 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 GSTM5P1-201ENST00000434751 660 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX1P22670 KPNA2P1-201ENST00000458289 1591 ntBASIC5.78□□□□□ -1.48
RFX1P22670 RPL21P41-201ENST00000459863 264 ntBASIC5.78□□□□□ -1.48
RFX1P22670 CEACAMP10-202ENST00000495431 496 ntBASIC5.78□□□□□ -1.48
RFX1P22670 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX1P22670 PTP4A1P4-201ENST00000512479 322 ntBASIC5.78□□□□□ -1.48
RFX1P22670 RNU6-1332P-201ENST00000516666 104 ntBASIC5.78□□□□□ -1.48
RFX1P22670 RNA5SP230-201ENST00000517039 122 ntBASIC5.78□□□□□ -1.48
RFX1P22670 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX1P22670 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX1P22670 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 AC007938.3-201ENST00000604965 623 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC104118.1-201ENST00000607625 1589 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC034102.8-201ENST00000615146 484 ntBASIC5.78□□□□□ -1.48
RFX1P22670 MIR6128-201ENST00000615528 109 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC091925.1-201ENST00000623204 462 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC074101.1-201ENST00000637861 241 ntBASIC5.78□□□□□ -1.48
RFX1P22670 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX1P22670 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
RFX1P22670 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RFX1P22670 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX1P22670 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX1P22670 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RFX1P22670 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX1P22670 Y_RNA.5-201ENST00000362334 102 ntBASIC5.77□□□□□ -1.49
RFX1P22670 SNORA56-201ENST00000383966 129 ntBASIC5.77□□□□□ -1.49
RFX1P22670 RNU6-1040P-201ENST00000383974 107 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AC097374.1-203ENST00000400783 485 ntBASIC5.77□□□□□ -1.49
RFX1P22670 RNA5SP296-201ENST00000410523 111 ntBASIC5.77□□□□□ -1.49
RFX1P22670 RNU4-25P-201ENST00000410569 230 ntBASIC5.77□□□□□ -1.49
RFX1P22670 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
RFX1P22670 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.77□□□□□ -1.49
RFX1P22670 AC244098.2-201ENST00000422068 99 ntBASIC5.77□□□□□ -1.49
RFX1P22670 RPL21P109-201ENST00000422213 475 ntBASIC5.77□□□□□ -1.49
RFX1P22670 NRBF2P3-201ENST00000432731 865 ntBASIC5.77□□□□□ -1.49
RFX1P22670 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 AL359672.1-201ENST00000442302 409 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AL035666.1-201ENST00000446195 348 ntBASIC5.77□□□□□ -1.49
RFX1P22670 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX1P22670 AL359073.1-201ENST00000448036 403 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.77□□□□□ -1.49
RFX1P22670 MIR2053-201ENST00000459295 91 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AC087588.1-201ENST00000462203 316 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AC087884.1-201ENST00000469738 328 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.77□□□□□ -1.49
RFX1P22670 AC110792.1-201ENST00000491826 472 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX1P22670 RN7SKP295-201ENST00000517264 153 ntBASIC5.77□□□□□ -1.49
RFX1P22670 RNU6-323P-201ENST00000521915 107 ntBASIC5.77□□□□□ -1.49
RFX1P22670 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.77□□□□□ -1.49
RFX1P22670 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
RFX1P22670 MIR5692A1-201ENST00000580523 69 ntBASIC5.77□□□□□ -1.49
RFX1P22670 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.77□□□□□ -1.49
RFX1P22670 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.77□□□□□ -1.49
RFX1P22670 AL121655.1-201ENST00000605811 308 ntBASIC5.77□□□□□ -1.49
RFX1P22670 MIR15A-201ENST00000607334 83 ntBASIC5.77□□□□□ -1.49
RFX1P22670 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RFX1P22670 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX1P22670 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.76□□□□□ -1.49
RFX1P22670 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFX1P22670 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RFX1P22670 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RFX1P22670 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFX1P22670 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFX1P22670 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX1P22670 RNU6-288P-201ENST00000363690 104 ntBASIC5.76□□□□□ -1.49
RFX1P22670 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX1P22670 AL356057.3-201ENST00000402607 340 ntBASIC5.76□□□□□ -1.49
RFX1P22670 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms