Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MIR1289-1-201ENST00000408836 144 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 RNU4-47P-201ENST00000410876 114 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 HMGN1P14-201ENST00000412459 517 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC083875.1-201ENST00000419509 405 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 RPS27AP14-201ENST00000422868 454 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC6P09630 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC6P09630 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 RPL37P21-201ENST00000435890 276 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC244505.5-201ENST00000443639 207 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 VN1R10P-201ENST00000447106 875 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 RPL39P6-201ENST00000448289 150 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXC6P09630 KLF3P2-201ENST00000465138 268 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 RPS3AP14-201ENST00000483907 780 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC109464.2-201ENST00000510242 943 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC026412.2-201ENST00000512270 1075 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 RNU6-488P-201ENST00000515918 99 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 RN7SKP83-201ENST00000516512 178 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC013828.2-201ENST00000532487 235 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 TPRKBP2-201ENST00000565969 475 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 MIR5697-201ENST00000578045 78 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 MIR4276-201ENST00000584832 70 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC6P09630 AL139286.1-201ENST00000604465 483 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 AC004825.2-201ENST00000616634 455 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 OR5AK4P-201ENST00000635912 903 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 OR5H6-203ENST00000642105 978 ntBASIC3.9□□□□□ -1.79
HOXC6P09630 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC6P09630 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC6P09630 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HOXC6P09630 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC6P09630 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC6P09630 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC6P09630 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC6P09630 RNA5SP322-201ENST00000363617 119 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 RNU6-289P-201ENST00000364093 107 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 RNU6-444P-201ENST00000383988 108 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 MIR3074-201ENST00000384885 81 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 U8.14-201ENST00000390843 143 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC6P09630 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC6P09630 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 AIMP1P1-201ENST00000418670 937 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 RPL36P19-201ENST00000430744 301 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXC6P09630 RBMX2P4-201ENST00000441256 376 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 RPS29P31-201ENST00000446147 164 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC6P09630 AL645939.1-201ENST00000453429 797 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC6P09630 SNORD42A-201ENST00000459584 64 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC6P09630 HMGB1P21-201ENST00000502313 581 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC6P09630 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC6P09630 NDUFB4P2-201ENST00000509515 391 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC6P09630 RNU6-506P-201ENST00000516553 94 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 LARP7P2-201ENST00000575306 125 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC6P09630 PRELID3BP8-201ENST00000604148 295 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC6P09630 AC091834.1-201ENST00000614543 472 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 MIR6852-201ENST00000621699 66 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 CRYM-AS1-204ENST00000637983 556 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC6P09630 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC6P09630 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
HOXC6P09630 OR4G11P-202ENST00000642116 1414 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms