Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL1P09341 ARL4AP4-201ENST00000434170 518 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 MTND4LP10-201ENST00000435146 291 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AL358232.1-201ENST00000448030 501 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL1P09341 BX510359.1-201ENST00000456973 237 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 S100A11P2-201ENST00000467589 312 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AC078857.1-201ENST00000469870 667 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 OR52A4P-202ENST00000481634 799 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 OR52A4P-203ENST00000498233 1014 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AC008427.1-201ENST00000503102 655 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL1P09341 XKRY-201ENST00000510392 1100 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 RN7SKP24-201ENST00000515888 284 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 MIR514B-201ENST00000516774 80 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 RNU1-40P-201ENST00000516816 164 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 RNU1-97P-201ENST00000516872 164 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.75□□□□□ -2.13
CXCL1P09341 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL1P09341 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL1P09341 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CXCL1P09341 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL1P09341 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL1P09341 AC010738.1-201ENST00000604970 987 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AC021851.1-201ENST00000608537 1082 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AP000254.1-201ENST00000609934 520 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CXCL1P09341 HMGB1P24-202ENST00000615653 685 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL1P09341 ZNF90P1-201ENST00000480493 1951 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 SEC63P2-201ENST00000503863 1939 ntBASIC1.75□□□□□ -2.13
CXCL1P09341 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.75□□□□□ -2.13
CXCL1P09341 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CXCL1P09341 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CXCL1P09341 AL591416.1-201ENST00000404015 867 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AL356967.1-201ENST00000406305 431 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL1P09341 HMGB3P31-201ENST00000413333 595 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 HMGB1P11-201ENST00000413899 637 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 PAICSP7-201ENST00000419829 962 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.74□□□□□ -2.13
CXCL1P09341 AC233981.1-201ENST00000423224 461 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 MTCO3P30-201ENST00000426425 670 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 RPP40P1-201ENST00000426762 456 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AL035410.1-201ENST00000427409 427 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL1P09341 AC090774.1-201ENST00000435925 246 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC009296.1-201ENST00000443146 155 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL1P09341 IFNA11P-201ENST00000446352 526 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL1P09341 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AP000936.2-201ENST00000447151 681 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC025033.1-201ENST00000463883 194 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 EIF4EP3-201ENST00000498782 656 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC034159.1-201ENST00000513885 583 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 RNA5SP24-201ENST00000516478 95 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 SNORA31.18-201ENST00000517043 134 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 COX6CP5-201ENST00000527162 228 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 OR5AQ1P-201ENST00000527596 927 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.74□□□□□ -2.13
CXCL1P09341 AC004217.3-201ENST00000551552 878 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL1P09341 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL1P09341 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.74□□□□□ -2.13
CXCL1P09341 ANP32BP3-201ENST00000559213 706 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC090888.1-201ENST00000561335 1141 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.74□□□□□ -2.13
CXCL1P09341 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 MIR4444-1-201ENST00000581696 74 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 MIR3935-201ENST00000583472 104 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 MIR4444-2-201ENST00000584390 74 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 MIR5002-201ENST00000584713 97 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC079791.1-201ENST00000605356 973 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AC007619.2-201ENST00000605743 379 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 AL159169.3-201ENST00000608871 561 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.74□□□□□ -2.13
CXCL1P09341 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL1P09341 AL365361.1-201ENST00000566942 3481 ntBASIC1.74□□□□□ -2.13
CXCL1P09341 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.73□□□□□ -2.13
CXCL1P09341 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 SNORA71.3-201ENST00000362582 128 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CXCL1P09341 U3.20-201ENST00000390909 217 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 U3.40-201ENST00000408706 208 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 RNU4-72P-201ENST00000410754 173 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AL030996.1-201ENST00000411430 235 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.73□□□□□ -2.13
CXCL1P09341 AC098614.2-201ENST00000426040 255 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 RNU7-23P-201ENST00000459465 62 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 PABPC1P3-201ENST00000469174 459 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 MTCO1P31-201ENST00000506355 492 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms