Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD4O95243 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
MBD4O95243 RNU6-853P-201ENST00000364306 107 ntBASIC3.98□□□□□ -1.77
MBD4O95243 Y_RNA.302-201ENST00000364997 102 ntBASIC3.98□□□□□ -1.77
MBD4O95243 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MBD4O95243 U3.20-201ENST00000390909 217 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AL590084.2-201ENST00000401481 382 ntBASIC3.98□□□□□ -1.77
MBD4O95243 SNORA11.1-201ENST00000408133 129 ntBASIC3.98□□□□□ -1.77
MBD4O95243 TPMTP3-201ENST00000411928 735 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 RSU1P2-202ENST00000437884 485 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 RPL23AP67-201ENST00000465341 474 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AC004263.1-201ENST00000479327 332 ntBASIC3.98□□□□□ -1.77
MBD4O95243 HSPE1P23-201ENST00000509838 286 ntBASIC3.98□□□□□ -1.77
MBD4O95243 MIR2276-201ENST00000516886 89 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AC034268.2-201ENST00000571784 482 ntBASIC3.98□□□□□ -1.77
MBD4O95243 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
MBD4O95243 COX6CP3-201ENST00000580869 223 ntBASIC3.98□□□□□ -1.77
MBD4O95243 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.98□□□□□ -1.77
MBD4O95243 AL161756.2-201ENST00000604597 246 ntBASIC3.98□□□□□ -1.77
MBD4O95243 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 AL442067.2-201ENST00000614033 363 ntBASIC3.98□□□□□ -1.77
MBD4O95243 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 AL031667.3-201ENST00000620124 655 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AP002791.1-201ENST00000623291 381 ntBASIC3.98□□□□□ -1.77
MBD4O95243 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.98□□□□□ -1.77
MBD4O95243 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
MBD4O95243 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD4O95243 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
MBD4O95243 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MBD4O95243 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
MBD4O95243 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.97□□□□□ -1.77
MBD4O95243 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
MBD4O95243 AL357075.1-201ENST00000404107 726 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AL356968.1-201ENST00000416622 474 ntBASIC3.97□□□□□ -1.77
MBD4O95243 RPL23AP82-202ENST00000427528 469 ntBASIC3.97□□□□□ -1.77
MBD4O95243 OR4K11P-201ENST00000431829 904 ntBASIC3.97□□□□□ -1.77
MBD4O95243 ATP5C1P1-201ENST00000441945 895 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.97□□□□□ -1.77
MBD4O95243 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 CENPBD1P1-201ENST00000464061 469 ntBASIC3.97□□□□□ -1.77
MBD4O95243 RPL32P34-201ENST00000486380 400 ntBASIC3.97□□□□□ -1.77
MBD4O95243 LINC00888-204ENST00000487386 421 ntBASIC3.97□□□□□ -1.77
MBD4O95243 PCBP2P3-201ENST00000509726 843 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MBD4O95243 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.97□□□□□ -1.77
MBD4O95243 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.97□□□□□ -1.77
MBD4O95243 AC055876.1-202ENST00000567053 138 ntBASIC3.97□□□□□ -1.77
MBD4O95243 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.97□□□□□ -1.77
MBD4O95243 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.97□□□□□ -1.77
MBD4O95243 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.97□□□□□ -1.77
MBD4O95243 CKS1BP3-201ENST00000600888 237 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AL606834.2-201ENST00000602954 668 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AC018714.1-201ENST00000605028 208 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AL356321.1-201ENST00000621360 228 ntBASIC3.97□□□□□ -1.77
MBD4O95243 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
MBD4O95243 AC009268.2-201ENST00000621925 457 ntBASIC3.97□□□□□ -1.77
MBD4O95243 AC073346.2-201ENST00000624724 2058 ntBASIC3.96□□□□□ -1.77
MBD4O95243 ZNF807-201ENST00000328088 1707 ntBASIC3.96□□□□□ -1.78
MBD4O95243 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MBD4O95243 MIR1290-201ENST00000408735 78 ntBASIC3.96□□□□□ -1.78
MBD4O95243 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MBD4O95243 RAP1BP1-201ENST00000412709 553 ntBASIC3.96□□□□□ -1.78
MBD4O95243 MTND1P21-201ENST00000412991 285 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.96□□□□□ -1.78
MBD4O95243 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.96□□□□□ -1.78
MBD4O95243 ARF4P2-201ENST00000430209 526 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.96□□□□□ -1.78
MBD4O95243 AC090774.1-201ENST00000435925 246 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AL592447.1-201ENST00000447592 540 ntBASIC3.96□□□□□ -1.78
MBD4O95243 SSXP4-201ENST00000451349 245 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AC021146.5-201ENST00000503544 545 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MBD4O95243 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.96□□□□□ -1.78
MBD4O95243 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.96□□□□□ -1.78
MBD4O95243 AL359273.1-201ENST00000510918 627 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.96□□□□□ -1.78
MBD4O95243 RNU6-678P-201ENST00000516832 109 ntBASIC3.96□□□□□ -1.78
MBD4O95243 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.96□□□□□ -1.78
MBD4O95243 FAM60DP-201ENST00000524174 632 ntBASIC3.96□□□□□ -1.78
MBD4O95243 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.96□□□□□ -1.78
MBD4O95243 LRRC34P1-201ENST00000542742 915 ntBASIC3.96□□□□□ -1.78
MBD4O95243 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms