Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL049714.1-201ENST00000466686 347 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC103851.1-201ENST00000506833 274 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 RNU6-1314P-201ENST00000517139 104 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC107953.1-201ENST00000522216 297 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 PSMA2P1-201ENST00000526365 646 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 COX6CP3-201ENST00000580869 223 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC005255.1-201ENST00000593748 216 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AL360085.1-201ENST00000604713 532 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC021646.1-201ENST00000605469 484 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 RMST_7.1-201ENST00000621935 268 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC138305.3-201ENST00000624988 240 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
GRIN3BO60391 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.39□□□□□ -1.55
GRIN3BO60391 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
GRIN3BO60391 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
GRIN3BO60391 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GRIN3BO60391 MTND5P1-201ENST00000445440 1375 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 MTND4P27-201ENST00000450813 1354 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 MTND4P35-201ENST00000604257 1375 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC016588.2-201ENST00000632484 3021 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
GRIN3BO60391 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 HSPE1P11-201ENST00000339579 310 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 Y_RNA.22-201ENST00000362492 102 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 UBBP2-201ENST00000376781 231 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 MIR558-201ENST00000384920 94 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 MIR454-201ENST00000390180 115 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 TXNP7-201ENST00000406296 293 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 RNU6-1148P-201ENST00000410992 104 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC104333.2-201ENST00000422630 192 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 MED13P1-201ENST00000428342 171 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 OR4F13P-201ENST00000428478 931 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 CYCSP32-201ENST00000440548 321 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 HMGB3P9-201ENST00000441799 583 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC012671.1-201ENST00000451912 203 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 RPS20P21-201ENST00000466859 343 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC010683.1-201ENST00000473673 378 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 HMGB1P21-201ENST00000502313 581 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 COX7A2P2-201ENST00000505291 250 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AL592156.1-201ENST00000508758 304 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.38□□□□□ -1.55
GRIN3BO60391 AC112206.3-201ENST00000514578 389 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.38□□□□□ -1.55
GRIN3BO60391 RPL23AP53-201ENST00000521854 457 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.38□□□□□ -1.55
GRIN3BO60391 AP003072.1-201ENST00000531740 145 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.38□□□□□ -1.55
GRIN3BO60391 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 LSM3P2-201ENST00000551246 273 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.38□□□□□ -1.55
GRIN3BO60391 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 AC093913.1-201ENST00000614178 329 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GRIN3BO60391 AL713922.2-201ENST00000619384 716 ntBASIC5.38□□□□□ -1.55
GRIN3BO60391 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
GRIN3BO60391 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GRIN3BO60391 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.38□□□□□ -1.55
GRIN3BO60391 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GRIN3BO60391 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 FAM91A3P-201ENST00000456826 2544 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIN3BO60391 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIN3BO60391 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIN3BO60391 RNU5E-8P-201ENST00000363502 116 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 RNU6-39P-201ENST00000384344 107 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 RNU6-178P-201ENST00000384631 104 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 MIR514A2-201ENST00000385131 88 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 MIR514A3-201ENST00000385132 88 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 HMGN1P24-201ENST00000412282 298 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 AL645937.1-202ENST00000421799 937 ntBASIC5.37□□□□□ -1.55
GRIN3BO60391 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms