Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 snoU13.4-201ENST00000458916 104 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 snoU13.26-201ENST00000459452 105 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 RPS29P12-201ENST00000460178 152 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AC128713.1-201ENST00000471495 306 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 GZMAP1-201ENST00000503054 631 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 OR5H5P-201ENST00000503164 928 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 RNU6-416P-201ENST00000516265 103 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AC022690.1-201ENST00000526681 550 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AP003385.6-201ENST00000531603 374 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AC105137.2-201ENST00000569073 466 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AC012182.1-201ENST00000570133 895 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 BNIP3P4-201ENST00000604946 565 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AC016542.1-201ENST00000608259 493 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 AC025263.3-201ENST00000622965 1396 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 RNU6-1180P-201ENST00000364935 107 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UBFD1O14562 HMGB1P11-201ENST00000413899 637 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 TATDN1P1-201ENST00000414123 891 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 UBE2V1P9-201ENST00000414760 368 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
UBFD1O14562 AC006548.1-201ENST00000427470 102 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 MTATP6P11-201ENST00000428071 670 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.2□□□□□ -2.06
UBFD1O14562 AC015908.1-201ENST00000478739 476 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.2□□□□□ -2.06
UBFD1O14562 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.2□□□□□ -2.06
UBFD1O14562 SNORA48.9-201ENST00000516419 162 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 AP001029.3-201ENST00000588063 596 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.2□□□□□ -2.06
UBFD1O14562 AC096586.1-201ENST00000610267 561 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 AC068722.2-201ENST00000618734 544 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 AC098679.5-201ENST00000624394 571 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 CR381572.1-201ENST00000625098 102 ntBASIC2.2□□□□□ -2.06
UBFD1O14562 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.2□□□□□ -2.06
UBFD1O14562 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UBFD1O14562 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UBFD1O14562 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 AC012321.1-201ENST00000561622 1588 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.19□□□□□ -2.06
UBFD1O14562 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.19□□□□□ -2.06
UBFD1O14562 AC093536.2-201ENST00000565257 1406 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UBFD1O14562 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.19□□□□□ -2.06
UBFD1O14562 AL035410.1-201ENST00000427409 427 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 SNRPEP4-201ENST00000435815 279 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.19□□□□□ -2.06
UBFD1O14562 BX248409.1-201ENST00000455497 255 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.19□□□□□ -2.06
UBFD1O14562 GAPDHP39-201ENST00000481866 979 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 RN7SL636P-201ENST00000497504 294 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC135721.1-201ENST00000497954 479 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC104108.1-201ENST00000509930 412 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.19□□□□□ -2.06
UBFD1O14562 AC126177.3-201ENST00000551839 688 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 ACTR3BP3-201ENST00000565577 979 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 MYL12BP1-201ENST00000569826 507 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC090666.1-201ENST00000578241 445 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 COX6CP3-201ENST00000580869 223 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 MIR4524B-201ENST00000581569 115 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
UBFD1O14562 DNAJC19P3-201ENST00000594491 331 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 AC068620.4-201ENST00000636730 1182 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UBFD1O14562 MTND5P31-201ENST00000419366 1374 ntBASIC2.19□□□□□ -2.06
UBFD1O14562 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UBFD1O14562 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
UBFD1O14562 AC008432.1-201ENST00000615912 1320 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
UBFD1O14562 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBFD1O14562 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBFD1O14562 OR5T3-201ENST00000303059 1023 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 XGY1-201ENST00000381172 446 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 RNU6-921P-201ENST00000384361 107 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 RPS4XP7-201ENST00000406274 780 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.18□□□□□ -2.06
UBFD1O14562 AL445183.3-201ENST00000414168 502 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AL513477.1-202ENST00000417061 214 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.18□□□□□ -2.06
UBFD1O14562 ZFAND6P1-201ENST00000434138 605 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 HMGB3P12-201ENST00000438745 556 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms