Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNA5SP309-201ENST00000516670 106 ntBASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 RNA5SP290-201ENST00000517133 127 ntBASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC012400.1-201ENST00000518452 381 ntBASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 FAM35BP-202ENST00000497389 3337 ntBASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC131971.1-201ENST00000332881 1482 ntBASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.39□□□□□ -1.39
GTF3C3Q9Y5Q9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF962P-201ENST00000443465 3140 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RNA5SP502-201ENST00000362694 119 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-767P-201ENST00000384132 107 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-434P-201ENST00000384376 107 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL162578.1-201ENST00000406202 378 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 HMGN1P20-201ENST00000411849 300 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC007919.1-201ENST00000429380 217 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 PNKDP1-201ENST00000435914 430 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC023194.2-201ENST00000465398 406 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RPS23P3-201ENST00000470993 430 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AP000852.1-201ENST00000472460 573 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL7AP6-201ENST00000477943 801 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AP001086.1-201ENST00000494882 321 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL30P5-201ENST00000494923 336 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC025445.1-201ENST00000502728 300 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 Y_RNA.667-201ENST00000516212 107 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC135001.1-201ENST00000544546 283 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC013553.2-201ENST00000604244 589 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL161798.1-201ENST00000604630 131 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 Z82243.1-201ENST00000609432 473 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC007497.1-201ENST00000610421 561 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL591926.8-201ENST00000616876 211 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC211486.4-201ENST00000621495 113 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 PSMD5-AS1-215ENST00000640622 205 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AL442639.1-201ENST00000625030 1899 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 AC007785.2-201ENST00000598627 1916 ntBASIC6.38□□□□□ -1.39
GTF3C3Q9Y5Q9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RN7SKP113-201ENST00000363891 295 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-512P-201ENST00000364438 103 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-393P-201ENST00000384475 107 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RPS4XP9-201ENST00000405151 780 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 MIR1203-201ENST00000408812 85 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF863P-201ENST00000426746 417 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 GPM6BP2-201ENST00000432046 144 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC00328-2P-201ENST00000436585 219 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 GPM6BP1-201ENST00000446387 144 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 HMGN2P26-201ENST00000463169 339 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL23AP65-201ENST00000475608 468 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 IFITM8P-201ENST00000522529 394 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC090281.1-201ENST00000523019 276 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 TRAV28-201ENST00000557548 323 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC022306.2-201ENST00000617563 647 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC132068.1-201ENST00000623805 459 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 AC099654.5-201ENST00000636479 350 ntBASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
GTF3C3Q9Y5Q9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms