Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNU6-156P-201ENST00000621869 107 ntBASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 U6.101-201ENST00000637707 76 ntBASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 AC107081.3-201ENST00000612715 2034 ntBASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 AP002001.2-201ENST00000529025 1469 ntBASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGB1Q9Y5G3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 NMD3P1-201ENST00000439704 1488 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORA72.1-201ENST00000363485 129 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORD35B-201ENST00000363660 87 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL583835.1-201ENST00000399570 407 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 FGF7P8-201ENST00000402994 292 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 GSTA9P-201ENST00000406231 611 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 TPMTP2-201ENST00000414372 726 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC138393.2-201ENST00000414742 246 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 BX295541.1-201ENST00000417774 250 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 RPS3AP54-201ENST00000435535 734 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC073614.1-201ENST00000438690 650 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 MTATP6P30-201ENST00000443540 664 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC092001.1-201ENST00000453012 261 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 BX322784.1-201ENST00000455793 1077 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 snoU13.22-201ENST00000459428 104 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 UQCRHP4-201ENST00000471686 272 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC106872.3-201ENST00000495104 446 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AP002812.1-201ENST00000495378 474 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 FCF1P3-201ENST00000496394 590 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC009646.1-201ENST00000510455 318 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 SOD1P3-201ENST00000518682 454 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AP003467.2-201ENST00000520175 319 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 HSPE1P3-201ENST00000559254 309 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC006130.2-201ENST00000586202 326 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC103710.1-201ENST00000610003 901 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AC006133.1-201ENST00000617106 264 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGB1Q9Y5G3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 SPRR2C-201ENST00000290702 219 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 OR5J1P-201ENST00000313544 939 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RNY4P14-201ENST00000363656 96 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP280-201ENST00000364196 304 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU1-13P-201ENST00000384499 162 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU6-441P-201ENST00000384545 106 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR554-201ENST00000384874 96 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORD115.1-201ENST00000391109 76 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 EIF5P1-201ENST00000400019 1231 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AL391417.1-201ENST00000404100 426 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AL590002.1-201ENST00000406554 418 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR1305-201ENST00000408300 86 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR320C1-201ENST00000408566 88 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP202-201ENST00000410439 330 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AC009237.5-201ENST00000414271 501 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AL358472.1-201ENST00000431295 329 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGB1P37-201ENST00000439613 609 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 AP000542.1-201ENST00000448473 371 ntBASIC3.62□□□□□ -1.83
PCDHGB1Q9Y5G3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms