Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 OR2AM1P-201ENST00000422137 422 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC245028.1-201ENST00000423259 256 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AL160275.3-201ENST00000423876 471 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC092017.2-201ENST00000427600 362 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC016712.1-201ENST00000431088 378 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 KRT8P51-201ENST00000438938 274 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 LINC02210-201ENST00000444561 288 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 RNU6-475P-201ENST00000516073 104 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 Y_RNA.668-201ENST00000516233 93 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 RNU4-77P-201ENST00000516692 156 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 RNU6-388P-201ENST00000517012 105 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 RNU6-389P-201ENST00000517048 105 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 A2MP1-204ENST00000566278 4130 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC002044.1-201ENST00000606707 158 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC062037.2-201ENST00000610137 73 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 AC087385.3-201ENST00000620477 187 ntBASIC5.78□□□□□ -1.48
NOD1Q9Y239 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NOD1Q9Y239 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NOD1Q9Y239 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NOD1Q9Y239 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NOD1Q9Y239 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NOD1Q9Y239 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC005332.5-201ENST00000591222 2919 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NOD1Q9Y239 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC138393.1-203ENST00000327086 343 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 Y_RNA.39-201ENST00000362620 98 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 RNU6-288P-201ENST00000363690 104 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 Y_RNA.307-201ENST00000365022 117 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 RHOT1P2-201ENST00000366423 333 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 DEFB109C-201ENST00000382575 264 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 DEFB109B-201ENST00000382656 264 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 Y_RNA.424-201ENST00000384063 103 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 SNORA41-201ENST00000384675 132 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 MIR1182-201ENST00000408363 97 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC096664.2-201ENST00000411843 406 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 EI24P4-201ENST00000423683 1078 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 RPS27AP12-201ENST00000429552 465 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL645568.3-201ENST00000433683 316 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC099799.1-201ENST00000439809 192 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC073465.2-201ENST00000440938 498 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC008264.1-201ENST00000447612 367 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL583843.1-201ENST00000456070 346 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AP000926.1-201ENST00000479573 241 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC068781.1-201ENST00000488231 618 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 RN7SL244P-201ENST00000493405 297 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC009901.1-201ENST00000506703 541 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL671862.1-201ENST00000515851 349 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 BNIP3P1-201ENST00000547295 580 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 MIR4691-201ENST00000583764 85 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC005357.1-201ENST00000588399 301 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC012669.1-201ENST00000603209 283 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC107871.2-201ENST00000612894 502 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 HMGB1P24-202ENST00000615653 685 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL606534.2-204ENST00000635008 178 ntBASIC5.77□□□□□ -1.49
NOD1Q9Y239 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.77□□□□□ -1.49
NOD1Q9Y239 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 IRF5P1-201ENST00000504852 2164 ntBASIC5.76□□□□□ -1.49
NOD1Q9Y239 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NOD1Q9Y239 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NOD1Q9Y239 RNU6-266P-201ENST00000364225 107 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms