Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RNU6-356P-201ENST00000384140 107 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RNU6-43P-201ENST00000384302 107 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 MIR153-1-201ENST00000384914 90 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RPL23AP32-201ENST00000395315 459 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RPL32P23-201ENST00000397237 405 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AL080315.1-201ENST00000406055 466 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RNU2-62P-201ENST00000410868 191 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 GTF2IP13-201ENST00000438487 386 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 HMGB1P18-201ENST00000438801 619 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 BNIP3P2-201ENST00000441221 577 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC009963.2-201ENST00000453431 138 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 HMGB3P30-201ENST00000457863 606 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 Y_RNA.639-201ENST00000458981 102 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 MRPS17P3-201ENST00000465453 385 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC025445.1-201ENST00000502728 300 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 SNORA40.12-201ENST00000516329 111 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RNU6-1046P-201ENST00000516538 107 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 Y_RNA.691-201ENST00000516611 103 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 SNORD60.2-201ENST00000516883 86 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 RN7SKP234-201ENST00000517173 224 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AP000827.1-201ENST00000527814 258 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC099489.2-201ENST00000574976 260 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC233309.1-201ENST00000619522 751 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 AC009161.2-201ENST00000624626 138 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 U3.53-201ENST00000628922 216 ntBASIC4.7□□□□□ -1.66
CD248Q9HCU0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD248Q9HCU0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD248Q9HCU0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD248Q9HCU0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD248Q9HCU0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD248Q9HCU0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC106871.1-201ENST00000568324 3102 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 MTND4P35-201ENST00000604257 1375 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 NACAP2-201ENST00000318548 624 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 SNORA70E-201ENST00000384492 135 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD248Q9HCU0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 RNU2-28P-201ENST00000410457 189 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 RNU6-272P-201ENST00000411028 104 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 Z74021.1-201ENST00000423610 407 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AL590639.1-201ENST00000456484 337 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC010618.1-201ENST00000469924 477 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 PCBP2P3-201ENST00000509726 843 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 Y_RNA.711-201ENST00000516993 102 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC022861.1-201ENST00000522981 663 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 MIR5186-201ENST00000577504 120 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC010525.2-201ENST00000590920 195 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC005255.1-201ENST00000593748 216 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC090617.10-201ENST00000624308 134 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC011944.2-201ENST00000624440 683 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD248Q9HCU0 AC007823.1-201ENST00000569932 1566 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.69□□□□□ -1.66
CD248Q9HCU0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CD248Q9HCU0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC011978.2-201ENST00000569835 2054 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RNA5SP515-201ENST00000364570 118 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 RNA5SP479-201ENST00000364858 117 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 RNU6-574P-201ENST00000384265 107 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 RPL5P18-201ENST00000406671 891 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 RNU2-6P-201ENST00000411404 190 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms