Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF38Q9H0F5 UBE2L4-201ENST00000587688 464 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 GLUD1P4-201ENST00000590914 418 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AC068790.3-201ENST00000602988 553 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AC008782.1-201ENST00000603386 430 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF38Q9H0F5 APOOP1-201ENST00000604695 592 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AL121992.2-201ENST00000606262 256 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AC019193.3-201ENST00000609144 554 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 7SK.10-201ENST00000621414 298 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AL078596.1-201ENST00000624856 447 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 AL159972.1-201ENST00000625150 448 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF38Q9H0F5 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.84□□□□□ -1.63
RNF38Q9H0F5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF38Q9H0F5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.84□□□□□ -1.64
RNF38Q9H0F5 Z73965.1-201ENST00000623412 2297 ntBASIC4.84□□□□□ -1.64
RNF38Q9H0F5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 MUC2-202ENST00000613187 4845 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNA5SP447-201ENST00000363749 119 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 SNORA22B-201ENST00000383876 138 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNU6-639P-201ENST00000384074 107 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNU6-339P-201ENST00000384310 107 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 MIR514A2-201ENST00000385131 88 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 MIR514A3-201ENST00000385132 88 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNY4P36-201ENST00000391116 96 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 U3.35-201ENST00000408405 208 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.605-201ENST00000410577 105 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNU6-193P-201ENST00000410977 107 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC005517.2-201ENST00000424673 553 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC137499.1-201ENST00000427602 88 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RPS20P5-201ENST00000434808 360 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 HMGB3P11-201ENST00000440127 604 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RPL23AP33-201ENST00000442301 452 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 SCARNA10-201ENST00000459255 330 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RPL23AP41-201ENST00000484754 458 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC009643.1-201ENST00000532030 391 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AC060771.1-201ENST00000582031 164 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AL355812.1-201ENST00000603215 216 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 AL158196.1-201ENST00000616786 434 ntBASIC4.83□□□□□ -1.64
RNF38Q9H0F5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF38Q9H0F5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RAD17P1-201ENST00000418130 2042 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RPL32P3-201ENST00000359025 275 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.31-201ENST00000362574 102 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RNU6-1309P-201ENST00000363305 108 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 MIR659-201ENST00000384963 97 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 MTCYBP4-201ENST00000401524 249 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RNU2-15P-201ENST00000410692 191 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RPS27AP12-201ENST00000429552 465 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AL162591.2-201ENST00000449634 317 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.635-201ENST00000459041 101 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AP001992.1-205ENST00000462248 379 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC068587.1-201ENST00000483613 781 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC083904.1-201ENST00000487828 231 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC026979.1-201ENST00000492525 396 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 MIR3668-201ENST00000582138 75 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms