Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RNA5SP107-201ENST00000411358 122 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP2Q99959 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC004866.2-201ENST00000438285 481 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 AC005297.2-201ENST00000450430 606 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 MTCO3P11-201ENST00000455103 774 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 AP001992.1-205ENST00000462248 379 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC090453.1-201ENST00000495560 436 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 LTV1P1-201ENST00000510683 1237 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP2Q99959 OR5AK1P-201ENST00000524837 922 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 SLC2A13P1-201ENST00000531560 322 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 CR383656.7-201ENST00000548164 174 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 MIR4298-201ENST00000584380 73 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP2Q99959 AL022099.1-201ENST00000604551 712 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC012468.1-201ENST00000604888 430 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC006270.3-201ENST00000605967 1036 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC245297.2-201ENST00000610119 565 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 MIR6867-201ENST00000610636 67 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP2Q99959 AL158063.1-201ENST00000615349 536 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKP2Q99959 AL732618.1-201ENST00000623251 301 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 PCMTD1P7-201ENST00000634506 357 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKP2Q99959 ZNF807-201ENST00000328088 1707 ntBASIC3.38□□□□□ -1.87
PKP2Q99959 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP2Q99959 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKP2Q99959 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PKP2Q99959 Y_RNA.194-201ENST00000363985 102 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 RNU6-1122P-201ENST00000384449 107 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 MT-TH-201ENST00000387441 69 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 SNORA26.8-201ENST00000391306 124 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 RPS15AP38-201ENST00000413110 372 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 MTATP6P27-201ENST00000416987 621 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 UBE2D3P2-201ENST00000424409 445 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 BX890604.2-201ENST00000427883 474 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AL590233.1-201ENST00000430017 456 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 EZH2P1-201ENST00000431167 291 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 MTND2P20-201ENST00000440805 661 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 ATP5C1P1-201ENST00000441945 895 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AL121871.1-201ENST00000443413 436 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP2Q99959 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 RPS4XP15-201ENST00000489210 795 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AL139099.1-201ENST00000497398 403 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC104685.1-201ENST00000502445 371 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP2Q99959 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP2Q99959 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC010460.1-201ENST00000507087 466 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 HMGB1P28-201ENST00000507778 552 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 RNY4P37-201ENST00000516225 96 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 ERHP1-201ENST00000523006 310 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 HSPA8P13-201ENST00000523715 472 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC022690.1-201ENST00000526681 550 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP2Q99959 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP2Q99959 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 MED28P6-201ENST00000558776 231 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AL845331.3-202ENST00000562856 261 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC012435.1-202ENST00000568772 240 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.37□□□□□ -1.87
PKP2Q99959 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP2Q99959 AC006254.3-201ENST00000603353 884 ntBASIC3.37□□□□□ -1.87
PKP2Q99959 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms