Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.67□□□□□ -2.14
CFAP54Q96N23 AC096772.1-201ENST00000609146 564 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 AC092881.1-201ENST00000638218 2733 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 NUP58P1-201ENST00000502546 1738 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 DDX43P2-201ENST00000604753 1354 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 RBBP8P1-201ENST00000449447 1844 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CFAP54Q96N23 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CFAP54Q96N23 AC009474.2-201ENST00000451383 136 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 RPL31P41-201ENST00000477967 372 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CFAP54Q96N23 U73479.1-201ENST00000618062 168 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 MIR6788-201ENST00000618842 66 ntBASIC1.67□□□□□ -2.14
CFAP54Q96N23 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
CFAP54Q96N23 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.67□□□□□ -2.14
CFAP54Q96N23 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.66□□□□□ -2.14
CFAP54Q96N23 MTND1P18-201ENST00000448191 573 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC025033.1-201ENST00000463883 194 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 RPL23AP44-201ENST00000482216 473 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC091544.1-201ENST00000484702 348 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 FAM106DP-201ENST00000586416 501 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC073348.1-201ENST00000623002 331 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CFAP54Q96N23 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.66□□□□□ -2.14
CFAP54Q96N23 FTH1P12-201ENST00000432137 551 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC079804.2-201ENST00000490376 200 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CFAP54Q96N23 FABP5P5-201ENST00000515537 406 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 RNA5SP395-201ENST00000516567 118 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AC016727.2-201ENST00000603988 621 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 AL137847.3-201ENST00000611521 109 ntBASIC1.66□□□□□ -2.14
CFAP54Q96N23 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CFAP54Q96N23 Y_RNA.115-201ENST00000363272 98 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 SNORA68.2-201ENST00000391263 128 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 TOMM22P1-201ENST00000418578 312 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 RPS3AP44-201ENST00000425466 790 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 SUMO2P6-201ENST00000505273 288 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.65□□□□□ -2.14
CFAP54Q96N23 AC080078.3-201ENST00000605407 463 ntBASIC1.65□□□□□ -2.14
CFAP54Q96N23 SETP10-201ENST00000424368 814 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 HMGN2P19-201ENST00000425149 265 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 AC109471.1-201ENST00000511631 612 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 VN1R74P-201ENST00000613259 503 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CFAP54Q96N23 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CFAP54Q96N23 RNA5SP338-201ENST00000410495 85 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 AL365400.1-201ENST00000431854 640 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 RNA5SP436-201ENST00000516020 115 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 AC087468.1-201ENST00000604365 630 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 AC012640.5-201ENST00000623897 319 ntBASIC1.65□□□□□ -2.15
CFAP54Q96N23 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.65□□□□□ -2.15
CFAP54Q96N23 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CFAP54Q96N23 RNA5SP160-201ENST00000364866 120 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 DHFRP5-201ENST00000406944 564 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC079776.3-201ENST00000450665 370 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.64□□□□□ -2.15
CFAP54Q96N23 RNU6-717P-201ENST00000459076 104 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC023825.1-201ENST00000566704 1030 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC068135.2-201ENST00000569293 1028 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC107294.3-201ENST00000609211 526 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC129850.1-201ENST00000436203 508 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AL583843.1-201ENST00000456070 346 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AMD1P1-201ENST00000457220 922 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.64□□□□□ -2.15
CFAP54Q96N23 AC068944.2-201ENST00000610373 403 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 AP000553.5-201ENST00000641933 54 ntBASIC1.64□□□□□ -2.15
CFAP54Q96N23 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CFAP54Q96N23 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC090255.1-201ENST00000495779 349 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC008121.3-201ENST00000618726 433 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CFAP54Q96N23 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 SETP8-201ENST00000435341 628 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 COX6CP12-201ENST00000446748 202 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC021087.2-201ENST00000504656 1203 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC022790.1-201ENST00000522872 204 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CFAP54Q96N23 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CFAP54Q96N23 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CFAP54Q96N23 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms