Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MS4A3Q96HJ5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MS4A3Q96HJ5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.26□□□□□ -1.41
MS4A3Q96HJ5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 RNU6-1141P-201ENST00000364520 107 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 RNU1-140P-201ENST00000365040 165 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 MIR1278-201ENST00000408753 81 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AL135786.1-201ENST00000415892 214 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AC008134.1-201ENST00000420943 193 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AL355433.1-201ENST00000422804 300 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AC134879.1-201ENST00000426062 394 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 GOT2P2-201ENST00000450663 1251 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AL021397.1-201ENST00000451806 248 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 RN7SL776P-201ENST00000493390 268 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 IGKV1D-32-201ENST00000517449 318 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AC120036.3-201ENST00000517826 292 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 RN7SL689P-201ENST00000577215 297 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 AL035470.1-201ENST00000622571 220 ntBASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MS4A3Q96HJ5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 Y_RNA.78-201ENST00000362970 110 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 SNORA63.5-201ENST00000363548 123 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 Y_RNA.243-201ENST00000364481 109 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 Y_RNA.432-201ENST00000384087 111 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RNU6-242P-201ENST00000384359 107 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 MIR199B-201ENST00000384849 110 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 SNORA48.5-201ENST00000391143 135 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 FAUP2-201ENST00000394301 401 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RNA5SP31-201ENST00000411144 127 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RNU2-55P-201ENST00000411146 174 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 MTND6P12-201ENST00000428247 522 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC007365.2-201ENST00000428806 458 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC007679.3-201ENST00000434035 414 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RN7SL306P-201ENST00000492941 296 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RN7SL775P-201ENST00000498361 336 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 LINC01085-203ENST00000511195 326 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 snoU109.6-201ENST00000516831 118 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC021006.3-201ENST00000530771 192 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC027667.1-201ENST00000545814 304 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 MIR4675-201ENST00000577898 77 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AL355333.1-201ENST00000605632 279 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AC080128.1-201ENST00000474389 1917 ntBASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MS4A3Q96HJ5 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A3Q96HJ5 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A3Q96HJ5 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A3Q96HJ5 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MS4A3Q96HJ5 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms