Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 CKAP2P1-201ENST00000555477 2049 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 SNORD81.2-201ENST00000365153 76 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-332P-201ENST00000391193 108 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 DSTNP4-201ENST00000399472 474 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL031679.1-201ENST00000400616 525 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL354751.2-201ENST00000415471 210 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 NPM1P24-201ENST00000428039 894 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 HMGB3P12-201ENST00000438745 556 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL136380.1-201ENST00000447970 162 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC104563.1-201ENST00000476147 376 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC034222.1-201ENST00000494052 532 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 SNORA40.12-201ENST00000516329 111 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 Y_RNA.675-201ENST00000516389 149 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC034105.3-201ENST00000565294 442 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 RPL23AP97-201ENST00000568955 471 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC015917.1-201ENST00000579654 510 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL355816.1-201ENST00000607951 118 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC131238.1-201ENST00000617135 328 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL356585.4-201ENST00000623078 1229 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AL158801.5-201ENST00000623123 465 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC091953.2-201ENST00000623979 160 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 EOGT-210ENST00000615922 1931 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 AC010329.2-201ENST00000595195 2737 ntBASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A3Q8N4M1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC092447.10-201ENST00000620607 1652 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RNU4-79P-201ENST00000362764 141 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-767P-201ENST00000384132 107 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL356432.1-201ENST00000405809 419 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 FAT1P1-201ENST00000406588 507 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL160275.2-201ENST00000412010 394 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 HSPE1P12-201ENST00000412576 301 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC019097.1-201ENST00000424783 735 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RPL36P19-201ENST00000430744 301 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL353597.2-202ENST00000434901 373 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RPS15AP9-201ENST00000439856 381 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL049734.2-201ENST00000441066 616 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 snoU13.24-201ENST00000458998 104 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 RPL23AP65-201ENST00000475608 468 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AP001025.2-201ENST00000490908 477 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AL139099.1-201ENST00000497398 403 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 HPRT1P3-201ENST00000539521 576 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC093027.1-201ENST00000546698 429 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC010201.1-201ENST00000605051 540 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 OR10AB1P-201ENST00000609613 938 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC024940.5-201ENST00000622889 474 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC009161.2-201ENST00000624626 138 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 AC090971.4-201ENST00000560291 1800 ntBASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SLC44A3Q8N4M1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A3Q8N4M1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms