Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC025857.2-201ENST00000602711 238 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 U2.1-201ENST00000618978 145 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AP000346.3-201ENST00000622821 210 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AL606534.2-204ENST00000635008 178 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
SIX5Q8N196 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 AC026951.1-201ENST00000559530 2459 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
SIX5Q8N196 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX5Q8N196 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX5Q8N196 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SIX5Q8N196 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SIX5Q8N196 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX5Q8N196 SNORA17.1-201ENST00000362945 126 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 SNORA5.1-201ENST00000384275 131 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RNU6-14P-201ENST00000384630 106 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RNU6-823P-201ENST00000391042 103 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 SNORA68.2-201ENST00000391263 128 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RN7SKP126-201ENST00000411143 300 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RPL7AP73-201ENST00000413490 353 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RPL21P90-201ENST00000415692 466 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 BX842559.1-201ENST00000419615 532 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.63□□□□□ -1.51
SIX5Q8N196 AL138785.1-201ENST00000425821 331 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 AC091390.1-201ENST00000433904 331 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 CKS1BP5-201ENST00000434172 273 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.63□□□□□ -1.51
SIX5Q8N196 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AL445687.2-201ENST00000458156 728 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.63□□□□□ -1.51
SIX5Q8N196 RNU7-187P-201ENST00000458985 68 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RPL21P41-201ENST00000459863 264 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 RN7SL346P-201ENST00000491561 294 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AC018437.1-201ENST00000492214 406 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AP005902.1-201ENST00000521358 186 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 ERHP1-201ENST00000523006 310 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.63□□□□□ -1.51
SIX5Q8N196 AC009852.2-201ENST00000567898 485 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AL355297.3-201ENST00000604082 446 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 MIR15A-201ENST00000607334 83 ntBASIC5.63□□□□□ -1.51
SIX5Q8N196 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SIX5Q8N196 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX5Q8N196 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
SIX5Q8N196 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SIX5Q8N196 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX5Q8N196 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
SIX5Q8N196 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SIX5Q8N196 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 AC073136.1-201ENST00000449426 2884 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SIX5Q8N196 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 AL031595.2-201ENST00000624215 19071 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 AC005224.3-201ENST00000584683 2140 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 RNA5SP123-201ENST00000363244 119 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 RNU6-1303P-201ENST00000364841 107 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 Y_RNA.314-201ENST00000365114 102 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 Y_RNA.380-201ENST00000365663 111 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 SNORA16A-201ENST00000384342 137 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 RNU6-1109P-201ENST00000391187 107 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 RPL29P29-201ENST00000448725 423 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 AC092324.1-201ENST00000468671 324 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AC104564.1-201ENST00000493028 407 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 MRPS33P2-201ENST00000507850 322 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 SCARNA16.4-201ENST00000516956 187 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 AC104576.1-201ENST00000524225 88 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AP000827.1-201ENST00000527814 258 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 BNIP3P1-201ENST00000547295 580 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.62□□□□□ -1.51
SIX5Q8N196 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.62□□□□□ -1.51
SIX5Q8N196 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 ELOCP5-201ENST00000604924 333 ntBASIC5.62□□□□□ -1.51
SIX5Q8N196 AC020634.1-201ENST00000608701 549 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms