Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR3912-201ENST00000577566 105 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL669831.4-202ENST00000590817 238 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 GAS5-AS1-201ENST00000602767 694 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AC006963.1-201ENST00000624003 1052 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 U3.6-201ENST00000363622 211 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 MIR592-201ENST00000384959 97 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 RNU6-837P-201ENST00000391056 108 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AL356057.3-201ENST00000402607 340 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 FCF1P2-201ENST00000415284 583 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC078785.3-201ENST00000476607 425 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC093278.1-201ENST00000494700 600 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 RPS29P21-201ENST00000496272 170 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 SNORA70.14-201ENST00000516205 110 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 UBTFL10-201ENST00000528532 562 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AP000790.1-201ENST00000528891 737 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC006111.3-201ENST00000622137 383 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC008993.2-201ENST00000631744 806 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 TAB3P1-202ENST00000452645 1634 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 AC092435.3-201ENST00000565538 3654 ntBASIC3.74□□□□□ -1.81
NPHP3Q7Z494 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 SNORD116.1-201ENST00000365628 92 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AL023807.1-201ENST00000407932 359 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 RNA5SP56-201ENST00000410277 118 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 snoU13.23-201ENST00000458863 104 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 snoU13.3-201ENST00000459441 104 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 RPS20P22-201ENST00000473700 357 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 OR5H5P-201ENST00000503164 928 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC093331.1-201ENST00000521474 169 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 IGKV3-31-201ENST00000523109 329 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC016877.3-201ENST00000606778 504 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 AC048347.1-201ENST00000624621 427 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.73□□□□□ -1.81
NPHP3Q7Z494 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP3Q7Z494 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 EI24P2-201ENST00000397776 1076 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 HSPE1P26-201ENST00000405341 275 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 RN7SKP58-201ENST00000411010 305 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 DPRXP1-201ENST00000426312 460 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 RPL7P20-201ENST00000520308 745 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 AC024257.5-201ENST00000612739 531 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 Z99496.1-201ENST00000469424 1477 ntBASIC3.72□□□□□ -1.81
NPHP3Q7Z494 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP3Q7Z494 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms