Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 MTND5P25-201ENST00000430499 799 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC090774.1-201ENST00000435925 246 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 SSXP4-201ENST00000451349 245 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC093663.1-201ENST00000497190 394 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC021678.1-201ENST00000505195 936 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC125611.2-201ENST00000551907 647 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC105224.1-201ENST00000587055 421 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD13P35453 RMST_8.1-201ENST00000610287 165 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RNVU1-4-201ENST00000612985 164 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 AP002791.1-201ENST00000623291 381 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC034229.5-201ENST00000624258 185 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC017037.3-201ENST00000625016 472 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 U6.98-201ENST00000637157 84 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD13P35453 DDX10P1-201ENST00000448545 1933 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC008568.2-201ENST00000623862 2313 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC091152.2-201ENST00000591628 2569 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD13P35453 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD13P35453 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXD13P35453 SDAD1P2-201ENST00000441308 2028 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 SNORA71.3-201ENST00000362582 128 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 MIR218-2-201ENST00000385006 110 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 MTND4P13-201ENST00000402078 1023 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 FAT1P1-201ENST00000406588 507 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 HMGB3P23-201ENST00000414981 585 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC007390.1-201ENST00000415722 356 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 MTND4P20-201ENST00000424125 869 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC234781.2-201ENST00000426370 994 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXD13P35453 MTND5P2-201ENST00000442927 1142 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 ATG12P2-201ENST00000456830 416 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AP1S2P1-201ENST00000457344 379 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 RPL23AP14-201ENST00000468281 468 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 RN7SL293P-201ENST00000481765 281 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 SNORA70.16-201ENST00000516390 95 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 MTATP6P15-201ENST00000527233 835 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HOXD13P35453 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXD13P35453 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXD13P35453 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC018714.1-201ENST00000605028 208 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC004067.1-201ENST00000608733 700 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 AC002076.2-201ENST00000617362 122 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD13P35453 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD13P35453 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD13P35453 AC138915.3-201ENST00000562908 1389 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 ZNF807-201ENST00000328088 1707 ntBASIC3.72□□□□□ -1.81
HOXD13P35453 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXD13P35453 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HOXD13P35453 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD13P35453 RIOK3P1-201ENST00000418778 1528 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD13P35453 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RNY4P24-201ENST00000362735 96 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 RNU6-223P-201ENST00000362830 107 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 SNORA62.3-201ENST00000365110 153 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AL359704.1-201ENST00000411586 781 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 HMGN1P24-201ENST00000412282 298 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 HSFY4P-201ENST00000415994 1181 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 AC005005.2-201ENST00000420779 380 ntBASIC3.71□□□□□ -1.82
HOXD13P35453 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms