Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC009487.4-201ENST00000624969 3585 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC016716.1-201ENST00000265882 708 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL596028.1-201ENST00000326971 197 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 U3.12-201ENST00000364498 214 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 RNU1-51P-201ENST00000365345 176 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 ATF1P1-201ENST00000406040 927 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL513475.1-201ENST00000406602 315 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 OR6C71P-201ENST00000432580 913 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 MRPS33P4-201ENST00000434892 317 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC126389.1-201ENST00000477436 290 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 RPS27P26-201ENST00000494583 239 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC090255.1-201ENST00000495779 349 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 CBX3P3-201ENST00000508108 532 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 XKRY-201ENST00000510392 1100 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC026436.1-201ENST00000510537 270 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 TTC39CP1-201ENST00000512513 755 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 OR4V1P-201ENST00000525394 1140 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AP001646.1-201ENST00000527936 915 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 TRAV28-201ENST00000557548 323 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 MIR3609-201ENST00000582661 80 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC013468.1-201ENST00000608680 598 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AL161629.2-201ENST00000615347 275 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC087359.1-201ENST00000508335 1740 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC009902.3-201ENST00000606235 2172 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 AC069528.2-201ENST00000624849 1991 ntBASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-1074P-201ENST00000383995 104 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 SNORA51.11-201ENST00000384442 131 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 Y_RNA.510-201ENST00000384511 114 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 MIR634-201ENST00000385208 97 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AL356057.1-202ENST00000402263 756 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AL513331.1-201ENST00000411908 397 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 HMGB3P2-201ENST00000411913 584 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 NANOGP5-201ENST00000424456 877 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 PGBD4P3-201ENST00000440731 581 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC233279.1-201ENST00000455300 423 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 RNU7-26P-201ENST00000458980 63 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC078857.1-201ENST00000469870 667 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 RPL31P41-201ENST00000477967 372 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC008427.1-201ENST00000503102 655 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC114781.4-201ENST00000513707 639 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 HMGB1P46-201ENST00000520062 610 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC025857.1-201ENST00000525252 377 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 EIF4EP5-201ENST00000528228 640 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 OR4R2P-201ENST00000530815 597 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AL442163.2-201ENST00000553912 710 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC009127.3-201ENST00000570531 403 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 MIR3117-201ENST00000584034 78 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 RPS15AP11-201ENST00000594193 385 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC112503.2-201ENST00000609005 552 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 HMGB1P24-202ENST00000615653 685 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 SCARNA15.3-201ENST00000626315 122 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 SCARNA4.1-201ENST00000628597 123 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 MIR203B-201ENST00000636080 86 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms