Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC021006.3-201ENST00000530771 192 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL435P-201ENST00000584418 282 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC104662.1-201ENST00000604448 511 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC008121.3-201ENST00000618726 433 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC090971.4-201ENST00000560291 1800 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC108751.5-201ENST00000492880 1336 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MTCO1P12-201ENST00000414273 1543 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SKP113-201ENST00000363891 295 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.187-201ENST00000363918 113 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.197-201ENST00000364004 102 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 SMIM11P1-201ENST00000369586 178 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-1127P-201ENST00000384580 107 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RPL30P2-201ENST00000414021 291 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 COX5BP7-201ENST00000414780 274 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC093106.2-201ENST00000428212 385 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RPS27AP12-201ENST00000429552 465 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 FABP5P14-201ENST00000437273 393 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MTCO3P45-201ENST00000443036 613 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 KNOP1P3-201ENST00000446933 426 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC073264.2-201ENST00000448886 166 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 HMGB3P22-202ENST00000451823 572 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC245028.2-201ENST00000458673 253 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RPL21P8-201ENST00000465083 535 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-256P-201ENST00000516747 97 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 RNA5SP373-201ENST00000517271 95 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 PTP4A1P6-201ENST00000531034 478 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC022882.1-201ENST00000532142 501 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 IMMP1LP2-201ENST00000552954 492 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC006270.2-201ENST00000578523 652 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC092747.3-201ENST00000603769 301 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC040896.1-201ENST00000613819 479 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 MIR6780A-201ENST00000615089 68 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 AC008013.2-202ENST00000637965 364 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 DDX10P1-201ENST00000448545 1933 ntBASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDC42EP3Q9UKI2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP95-201ENST00000362860 303 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.145-201ENST00000363527 102 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.146-201ENST00000363549 102 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SNORA70.2-201ENST00000364506 135 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-946P-201ENST00000383878 107 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SNORD56.6-201ENST00000384569 71 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RPL21P67-201ENST00000402896 478 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 PPIAP9-201ENST00000403866 498 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms