Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL132838.2-201ENST00000492041 314 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 HSPD1P15-201ENST00000505573 1122 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC060771.1-201ENST00000582031 164 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AP001029.3-201ENST00000588063 596 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 BPIFA4P-203ENST00000603168 689 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 RPL23AP92-201ENST00000603609 255 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC079684.1-201ENST00000621405 437 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 MTND5P42-201ENST00000637720 498 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AL022311.1-201ENST00000623726 19416 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC010300.1-201ENST00000600671 5134 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.234-201ENST00000364409 97 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.259-201ENST00000364619 101 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.315-201ENST00000365117 102 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 UBBP2-201ENST00000376781 231 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.579-201ENST00000390939 94 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 SSXP10-201ENST00000402595 565 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 MIR548P-201ENST00000408336 84 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 CYCSP19-201ENST00000411715 316 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AL117339.2-201ENST00000430475 180 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AL031584.1-201ENST00000447169 754 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 GMFBP1-201ENST00000467831 427 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 MTND4P17-201ENST00000470444 350 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 TTC39CP1-201ENST00000512513 755 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 RN7SKP256-201ENST00000517201 314 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 NARSP2-201ENST00000518524 679 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AC024224.1-201ENST00000538284 609 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AC006504.6-201ENST00000590142 199 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AC067852.4-201ENST00000590314 478 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 GLUD1P4-201ENST00000590914 418 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 Z98200.1-201ENST00000607298 470 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AL159972.1-201ENST00000625150 448 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 MIR4496-201ENST00000635896 61 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 ELL2P4-201ENST00000446870 1376 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 AL121839.2-201ENST00000565058 6943 ntBASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
PDLIM7Q9NR12 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL672167.1-205ENST00000641112 3080 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNU6-97P-201ENST00000363387 104 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.231-201ENST00000364358 102 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 SNORA63C-201ENST00000364578 129 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNU4-48P-201ENST00000365559 182 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNU6-1226P-201ENST00000384317 107 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNU6-831P-201ENST00000384548 107 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 OR4K11P-201ENST00000431829 904 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RPS20P5-201ENST00000434808 360 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC012671.1-201ENST00000451912 203 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 DHFRP3-201ENST00000455595 559 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC108751.2-201ENST00000469993 231 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC093767.1-201ENST00000504523 156 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms