Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC011933.2-201ENST00000578539 2790 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC092724.1-201ENST00000624623 3397 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 RNU6-384P-201ENST00000364900 104 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 Y_RNA.584-201ENST00000391090 114 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 CYCSP17-201ENST00000407870 315 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 RNU6-1001P-201ENST00000411265 100 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 MRPS21P5-201ENST00000417885 231 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 FHP1-201ENST00000442741 703 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 AL161636.2-201ENST00000445179 927 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 AL136038.1-201ENST00000497246 351 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 AC093870.1-201ENST00000506837 213 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 IGLVV-66-201ENST00000523818 341 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 GSTP1P1-201ENST00000548078 319 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 SCARNA4-201ENST00000629045 128 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 AL731556.1-201ENST00000394628 3711 ntBASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SCAF1Q9H7N4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 RNU6-768P-201ENST00000384683 107 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL451062.2-201ENST00000427515 271 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL714022.1-201ENST00000439897 151 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 SNX18P26-201ENST00000458433 740 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 U8.19-201ENST00000459095 133 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 RNU6-1061P-201ENST00000516530 99 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL358913.1-201ENST00000554342 121 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 Y_RNA.757-201ENST00000578934 114 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 RMST_6.1-201ENST00000611980 203 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AL161629.2-201ENST00000615347 275 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 LINC01109-201ENST00000603837 3081 ntBASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SCAF1Q9H7N4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 RN7SKP62-201ENST00000384539 329 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 SNORD78.1-201ENST00000390866 65 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AC124916.1-201ENST00000444020 547 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 MIR5695-201ENST00000579717 85 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AL139395.1-201ENST00000603662 160 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AL121890.5-201ENST00000620848 304 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AC061999.1-201ENST00000624454 177 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AL136360.1-201ENST00000503377 1900 ntBASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SCAF1Q9H7N4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC9.59□□□□□ -0.88
SCAF1Q9H7N4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
SCAF1Q9H7N4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 SNORD114-19-201ENST00000363072 75 ntBASIC9.58□□□□□ -0.88
SCAF1Q9H7N4 RNU2-22P-201ENST00000411266 212 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms