Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RNU6-406P-201ENST00000516470 107 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SCARNA11.1-201ENST00000516918 132 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 RNU6-182P-201ENST00000516970 105 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP471-201ENST00000516971 106 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 RNU6-897P-201ENST00000517135 105 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 IGKV2D-38-201ENST00000518423 240 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AP003733.2-201ENST00000529409 171 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 HIGD1AP5-201ENST00000529959 259 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AL442163.3-201ENST00000554110 156 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AL049839.1-201ENST00000556151 657 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC026470.2-201ENST00000561492 181 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 MIR3128-201ENST00000581957 66 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 MIR4664-201ENST00000583819 71 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 RN7SL664P-201ENST00000584239 305 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PRPF19P1-201ENST00000584766 898 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AP001120.4-201ENST00000590231 108 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC002545.1-201ENST00000592511 181 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AL355877.2-201ENST00000603670 358 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC123912.5-201ENST00000605470 343 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AL133481.2-203ENST00000607558 139 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC005046.1-201ENST00000608515 625 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC096772.1-201ENST00000609146 564 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SNX18P12-201ENST00000624821 759 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC073488.9-201ENST00000631601 754 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 THAP12P9-201ENST00000503971 2360 ntBASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LCE3DQ9BYE3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 PCAT14-202ENST00000627127 3935 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC104964.3-201ENST00000606115 2860 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 Z73965.1-201ENST00000623412 2297 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC083843.3-201ENST00000623679 2186 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC022336.2-201ENST00000568966 2538 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AP001029.2-203ENST00000589795 4910 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC118273.1-201ENST00000525324 3006 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC092681.1-201ENST00000297369 291 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RPL9P7-201ENST00000330965 580 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.180-201ENST00000363867 113 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP355-201ENST00000365317 135 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms