Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 AC011330.2-201ENST00000621680 635 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 AP002791.1-201ENST00000623291 381 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 AP000676.4-201ENST00000624659 623 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.56□□□□□ -2
RSPO3Q9BXY4 LINC02211-204ENST00000642024 1070 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO3Q9BXY4 MTCO1P6-201ENST00000481192 1384 ntBASIC2.56□□□□□ -2
RSPO3Q9BXY4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO3Q9BXY4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
RSPO3Q9BXY4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
RSPO3Q9BXY4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO3Q9BXY4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.56□□□□□ -2
RSPO3Q9BXY4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.56□□□□□ -2
RSPO3Q9BXY4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 OR5H2-201ENST00000355273 945 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 RNU4-68P-201ENST00000364314 141 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 SNORD116.1-201ENST00000365628 92 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 SNORA40.2-201ENST00000390847 128 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL079342.2-201ENST00000403367 482 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 RNA5SP344-201ENST00000411081 104 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 BMS1P22-201ENST00000414726 313 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 PAICSP7-201ENST00000419829 962 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 XKRYP1-201ENST00000423438 492 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC092447.3-201ENST00000426027 686 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 XKRYP2-201ENST00000432915 492 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 CR769776.1-201ENST00000441254 787 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 RAB11AP1-201ENST00000442978 646 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 COX6CP18-201ENST00000448769 222 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 GSTA11P-201ENST00000452866 669 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 MRPL42P4-201ENST00000453267 443 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL590639.1-201ENST00000456484 337 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC005410.1-202ENST00000460347 485 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC068587.2-201ENST00000478386 781 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC015724.1-201ENST00000478577 156 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC080014.1-201ENST00000496877 1201 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC098862.1-201ENST00000504991 413 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC118465.1-201ENST00000513820 1271 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 RNU6-311P-201ENST00000516224 102 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 RNA5SP468-201ENST00000516782 93 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 RN7SKP283-201ENST00000517197 270 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC027309.2-201ENST00000520566 192 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 HPRT1P3-201ENST00000539521 576 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC004217.3-201ENST00000551552 878 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC044913.1-201ENST00000557200 430 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC022031.1-201ENST00000585985 2593 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 VN1R83P-201ENST00000595685 445 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 VN1R88P-201ENST00000596787 292 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC024153.1-201ENST00000603103 365 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 NTAN1P1-201ENST00000603150 646 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC025263.3-201ENST00000622965 1396 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 AC092608.3-201ENST00000625017 386 ntBASIC2.55□□□□□ -2
RSPO3Q9BXY4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RSPO3Q9BXY4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.55□□□□□ -2
RSPO3Q9BXY4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC099786.3-201ENST00000565735 1410 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AP002907.1-201ENST00000606361 1430 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.54□□□□□ -2
RSPO3Q9BXY4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 RNU6-707P-201ENST00000364647 95 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 RNU6-1181P-201ENST00000384191 106 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 MIR525-201ENST00000384978 85 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 SFR1P1-201ENST00000403720 688 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 RNU4-65P-201ENST00000410473 140 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms