Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC114786.4-201ENST00000508771 728 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC010493.1-201ENST00000513479 292 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC017037.2-201ENST00000513850 890 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC024614.3-201ENST00000637860 256 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL136164.3-201ENST00000624429 3978 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL365440.1-201ENST00000436135 2167 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 U8.3-201ENST00000363321 132 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 SNORA5A-201ENST00000384111 134 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 RNU11-4P-201ENST00000391149 133 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 U3.32-201ENST00000408116 212 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 RNU6-712P-201ENST00000410558 100 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 RNU2-62P-201ENST00000410868 191 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC092447.6-201ENST00000414578 210 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MTCO3P12-201ENST00000416718 547 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 OR1AA1P-201ENST00000419597 916 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 PIGFP2-201ENST00000421400 651 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MTCO1P20-201ENST00000425366 358 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC137499.1-201ENST00000427602 88 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC092162.1-201ENST00000432828 434 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC093019.1-201ENST00000443135 252 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC090804.1-201ENST00000448870 490 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 RPS17P13-201ENST00000448974 407 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC099522.1-202ENST00000514718 367 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 RNU2-46P-201ENST00000517038 113 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AP003122.4-201ENST00000530980 758 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC018630.1-201ENST00000541376 925 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC123904.2-201ENST00000548059 300 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL157687.1-201ENST00000554853 619 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC012182.1-201ENST00000570133 895 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 COX6CP3-201ENST00000580869 223 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MIR7853-201ENST00000584820 132 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 UBE2L4-201ENST00000587688 464 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 PART1_1.1-201ENST00000611761 217 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MIR6500-201ENST00000622700 86 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL158801.5-201ENST00000623123 465 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 FRG1KP-201ENST00000623592 341 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC068880.5-201ENST00000624331 290 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MIR3651-201ENST00000630427 90 ntBASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN3Q9BTN0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RNU6-278P-201ENST00000390945 109 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RPL23AP32-201ENST00000395315 459 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RPS3AP36-201ENST00000398190 775 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RNU4-55P-201ENST00000410731 137 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RPS20P15-201ENST00000412792 311 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RGS17P1-201ENST00000423358 553 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC119618.1-201ENST00000434191 222 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms