Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 RPL23AP92-201ENST00000603609 255 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC009237.15-201ENST00000610252 501 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 BX664608.1-201ENST00000610519 487 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC131902.3-201ENST00000611767 581 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC095031.1-201ENST00000623685 672 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 TAB3P1-202ENST00000452645 1634 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AL355143.1-201ENST00000407101 841 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 YPEL5P1-201ENST00000419731 367 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AL645937.1-202ENST00000421799 937 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 RPL7P44-201ENST00000424827 742 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 RPL35AP12-201ENST00000425362 338 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 SEPT7P5-201ENST00000434048 306 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 RPL23AP74-201ENST00000437246 471 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 CAB39P1-201ENST00000502277 460 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC010374.2-201ENST00000512933 535 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC027309.2-201ENST00000520566 192 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC126177.3-201ENST00000551839 688 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC096947.1-201ENST00000603233 470 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC009220.3-201ENST00000604318 586 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC231759.1-201ENST00000616455 597 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC004808.1-201ENST00000627671 721 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 CYP3A51P-201ENST00000633513 256 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATL3Q6DD88 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATL3Q6DD88 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.09□□□□□ -1.91
ATL3Q6DD88 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.09□□□□□ -1.91
ATL3Q6DD88 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
ATL3Q6DD88 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ATL3Q6DD88 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATL3Q6DD88 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATL3Q6DD88 OR5H2-201ENST00000355273 945 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 RNU4-51P-201ENST00000364206 140 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 RNU6-657P-201ENST00000383904 107 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC016769.3-201ENST00000396562 315 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 UBA52P6-201ENST00000399822 382 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MTCO3P1-205ENST00000422088 832 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 MTND4LP10-201ENST00000435146 291 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 RPL21P2-201ENST00000440049 481 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC013828.1-201ENST00000481845 158 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 HIGD1AP13-201ENST00000509878 289 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 SNORA19.3-201ENST00000516165 130 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 SNRPGP16-201ENST00000533275 226 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 LARP7P2-201ENST00000575306 125 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR5708-201ENST00000579723 85 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR3670-2-201ENST00000582974 65 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR3670-1-201ENST00000584160 65 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR3670-3-201ENST00000584855 65 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC008962.1-201ENST00000605729 304 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATL3Q6DD88 AC092954.1-201ENST00000609121 445 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 AP001521.1-201ENST00000609150 300 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MIR3670-4-201ENST00000612260 65 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
ATL3Q6DD88 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATL3Q6DD88 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATL3Q6DD88 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
ATL3Q6DD88 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATL3Q6DD88 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATL3Q6DD88 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATL3Q6DD88 SNORD51-201ENST00000384320 80 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 RNA5SP171-201ENST00000391071 115 ntBASIC3.07□□□□□ -1.92
ATL3Q6DD88 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
ATL3Q6DD88 GTF2IP3-201ENST00000433887 494 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms