Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC105758.1-201ENST00000506038 399 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 SNORA70.11-201ENST00000515987 138 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 SNORA70.13-201ENST00000516116 138 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AP001880.2-201ENST00000538233 448 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 DYNLL1P4-201ENST00000549314 266 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 LSM6P2-201ENST00000552208 177 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC025857.2-201ENST00000602711 238 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 uc_338.9-201ENST00000617424 182 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC091953.5-201ENST00000622919 233 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RC3H1Q5TC82 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.4□□□□□ -1.39
RC3H1Q5TC82 AL138713.1-201ENST00000624026 2130 ntBASIC6.4□□□□□ -1.39
RC3H1Q5TC82 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RC3H1Q5TC82 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RC3H1Q5TC82 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
RC3H1Q5TC82 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 ZNF72P-201ENST00000425869 1908 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 NXPH1-205ENST00000602349 1953 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 SNORA2.3-201ENST00000383920 135 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC097374.1-203ENST00000400783 485 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AL590399.2-201ENST00000427536 309 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 RPL23AP69-201ENST00000431134 458 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 NDUFB1P2-201ENST00000449477 176 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 RPL23AP56-201ENST00000460778 453 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC026801.1-201ENST00000497178 464 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 ENPP7P9-201ENST00000514456 627 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 COX6CP3-201ENST00000580869 223 ntBASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RC3H1Q5TC82 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC008669.1-201ENST00000565823 2178 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 MAPK10-263ENST00000641052 4307 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC140134.1-201ENST00000511830 3544 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 RNA5SP258-201ENST00000362750 119 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 SNORA70F-201ENST00000384142 135 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 RNU6-550P-201ENST00000391057 101 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AL136372.1-201ENST00000403060 228 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AL445189.1-201ENST00000405722 338 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 RPS29P9-201ENST00000440360 171 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 NOTCH2P1-201ENST00000443481 624 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 RPL21P8-201ENST00000465083 535 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 SNORA14.1-201ENST00000516113 141 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AP003733.2-201ENST00000529409 171 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC009643.1-201ENST00000532030 391 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC106782.4-201ENST00000568264 210 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC090615.1-201ENST00000577519 154 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 VN1R84P-201ENST00000593697 235 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC012669.1-201ENST00000603209 283 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 HMGN2P28-201ENST00000606102 262 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 U2.17-201ENST00000611454 95 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AL161423.1-201ENST00000613700 262 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AC130454.1-201ENST00000622948 401 ntBASIC6.38□□□□□ -1.39
RC3H1Q5TC82 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms