Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL138880.2-201ENST00000616214 239 ntBASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 AC073968.1-201ENST00000618594 637 ntBASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 AC022960.3-201ENST00000619794 441 ntBASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 AC095031.1-201ENST00000623685 672 ntBASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.43□□□□□ -1.86
SHROOM1Q2M3G4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AC130650.2-201ENST00000618736 2403 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MTND5P27-201ENST00000428871 1720 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 RNU4-51P-201ENST00000364206 140 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 RNA5SP139-201ENST00000364340 117 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 RNA5SP126-201ENST00000365092 109 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 SNORA40.2-201ENST00000390847 128 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AC016769.3-201ENST00000396562 315 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 RNU2-52P-201ENST00000410680 190 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 NANOGP2-201ENST00000435391 727 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AL358794.1-201ENST00000445689 381 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MTCO3P2-201ENST00000457365 171 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 SNORA31.8-201ENST00000516327 108 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AP001189.2-201ENST00000527320 189 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MIR3912-201ENST00000577566 105 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MTCO2P2-201ENST00000591258 225 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 MTND3P19-201ENST00000603825 345 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 AC106754.1-201ENST00000562632 1513 ntBASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM1Q2M3G4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 U3.42-201ENST00000408746 214 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RNA5SP80-201ENST00000410475 111 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RNU4-22P-201ENST00000411058 166 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RPS7P13-201ENST00000413955 498 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 YPEL5P1-201ENST00000419731 367 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 GTF2IP7-202ENST00000436677 309 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC241584.1-201ENST00000438469 1241 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RPL23AP16-201ENST00000441715 421 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC093392.2-201ENST00000450682 337 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AL109933.2-201ENST00000452651 260 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC108860.1-201ENST00000484521 383 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC083906.5-201ENST00000503722 328 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 MLLT10P2-201ENST00000506434 249 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 ZNF705CP-201ENST00000530515 889 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 LARP7P2-201ENST00000575306 125 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 NRBF2P5-201ENST00000603087 788 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 RNU4-5P-201ENST00000607255 135 ntBASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM1Q2M3G4 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.86
SHROOM1Q2M3G4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SHROOM1Q2M3G4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-989P-201ENST00000362756 107 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RNU1-112P-201ENST00000364401 164 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 SNORA14A-201ENST00000364773 135 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 SNORD82-201ENST00000365530 70 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 LUZP4P1-201ENST00000415420 344 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RPL7P46-201ENST00000425129 740 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RPS24P13-201ENST00000442520 397 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 MTCO1P48-201ENST00000448024 1096 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 TRBV26-201ENST00000456572 344 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC104472.2-201ENST00000469035 601 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 ST13P14-201ENST00000474095 734 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AP001025.2-201ENST00000490908 477 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 BOLA3P3-201ENST00000505182 232 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RNA5SP217-201ENST00000515959 91 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC087808.1-201ENST00000520501 361 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC027309.2-201ENST00000520566 192 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC087276.1-201ENST00000529659 480 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms