Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 RNA5SP249-201ENST00000516127 99 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 RNU1-6P-201ENST00000516290 144 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 ERHP1-201ENST00000523006 310 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC008489.1-201ENST00000524271 483 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC023575.1-201ENST00000580510 358 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 MIR548S-201ENST00000581352 82 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC008752.3-201ENST00000588113 712 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 BNIP3P22-201ENST00000593399 556 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC012443.1-201ENST00000605605 231 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AL121992.2-201ENST00000606262 256 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 MIR6716-201ENST00000613413 80 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AL360181.4-201ENST00000621752 134 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC067931.1-201ENST00000624190 671 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AL008636.1-201ENST00000625038 1018 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 FER-210ENST00000628534 558 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 ZFRP1-201ENST00000457579 2970 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 MTND5P17-201ENST00000418405 1603 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX6-1P78426 OR52B1P-201ENST00000316506 909 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX6-1P78426 SNORA69-201ENST00000383895 132 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 RNU6-1158P-201ENST00000391167 107 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 RN7SKP263-201ENST00000411194 309 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 USP9YP6-201ENST00000413550 854 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 AL732292.1-201ENST00000426692 226 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC079780.1-201ENST00000428259 207 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 CALM1P1-201ENST00000442082 433 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 DPPA3P1-201ENST00000448050 469 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AL162591.2-201ENST00000449634 317 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX6-1P78426 snoU13.4-201ENST00000458916 104 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC108751.2-201ENST00000469993 231 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC078785.3-201ENST00000476607 425 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC110792.1-201ENST00000491826 472 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC078817.1-201ENST00000492623 435 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 HMGB1P22-201ENST00000505315 124 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC091868.1-201ENST00000508746 304 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC105417.1-201ENST00000514691 285 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 SNORD27.1-201ENST00000516319 72 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 SNORA40.12-201ENST00000516329 111 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AP001646.1-201ENST00000527936 915 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC118273.2-201ENST00000532092 465 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 OR5BN1P-201ENST00000532955 829 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX6-1P78426 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX6-1P78426 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC093249.4-201ENST00000564755 259 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX6-1P78426 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX6-1P78426 MIR3160-1-201ENST00000577972 85 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX6-1P78426 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC010591.1-201ENST00000603941 649 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 SDR42E1P2-201ENST00000614861 481 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AL354950.2-201ENST00000617939 290 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
NKX6-1P78426 YWHAEP7-203ENST00000622054 312 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 U6.114-201ENST00000636407 96 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX6-1P78426 AC009812.4-201ENST00000569134 1805 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 AL442639.1-201ENST00000625030 1899 ntBASIC4.11□□□□□ -1.75
NKX6-1P78426 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX6-1P78426 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms