Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-553P-201ENST00000364047 96 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.41□□□□□ -1.7
RHBDL3P58872 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RHBDL3P58872 U8.14-201ENST00000390843 143 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 FAT1P1-201ENST00000406588 507 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 HMGB3P23-201ENST00000414981 585 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC245054.1-201ENST00000420944 258 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 TMEM167AP1-201ENST00000423409 219 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDL3P58872 AL445669.1-201ENST00000426743 755 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDL3P58872 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.41□□□□□ -1.7
RHBDL3P58872 MED14P1-201ENST00000430517 648 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AL365396.1-201ENST00000430854 671 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDL3P58872 AC096638.2-201ENST00000434965 711 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 TXNP1-201ENST00000441872 371 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 RPL21P23-201ENST00000446654 460 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC006480.1-201ENST00000449887 378 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 SSXP4-201ENST00000451349 245 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC073387.1-201ENST00000453261 709 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDL3P58872 OR2A20P-203ENST00000498397 1268 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 RNU6-840P-201ENST00000517275 65 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 RANP9-201ENST00000519957 271 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDL3P58872 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDL3P58872 AC007458.1-201ENST00000542812 373 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC011260.1-201ENST00000578420 472 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AC084757.4-201ENST00000616350 526 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 AL603758.1-201ENST00000618654 241 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 MIR7975-201ENST00000619350 68 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDL3P58872 MTND5P33-201ENST00000571250 1450 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDL3P58872 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDL3P58872 MAPK10-253ENST00000641010 4072 ntBASIC4.41□□□□□ -1.7
RHBDL3P58872 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.4□□□□□ -1.7
RHBDL3P58872 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
RHBDL3P58872 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDL3P58872 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
RHBDL3P58872 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC109780.2-201ENST00000413467 845 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDL3P58872 RN7SL330P-201ENST00000469709 307 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDL3P58872 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC109464.2-201ENST00000510242 943 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 GMPSP1-201ENST00000514075 579 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDL3P58872 SNORA31.22-201ENST00000517204 135 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 HIGD1AP10-201ENST00000527837 282 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC008011.1-201ENST00000545989 227 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDL3P58872 MIR4474-201ENST00000579189 78 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 UBE2L4-201ENST00000587688 464 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 AP000403.1-201ENST00000603349 851 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 SRGNP1-201ENST00000603392 451 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 MIR8058-201ENST00000615737 89 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 AL158801.5-201ENST00000623123 465 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 AL356266.1-201ENST00000623311 483 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDL3P58872 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AL392088.2-201ENST00000637607 285 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RHBDL3P58872 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC005183.1-201ENST00000603687 1979 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC010733.2-201ENST00000589496 5702 ntBASIC4.4□□□□□ -1.71
RHBDL3P58872 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RHBDL3P58872 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDL3P58872 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RHBDL3P58872 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RHBDL3P58872 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDL3P58872 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDL3P58872 MIR490-201ENST00000384865 128 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 MIR493-201ENST00000385254 89 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDL3P58872 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDL3P58872 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDL3P58872 MTND2P24-201ENST00000453434 806 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDL3P58872 SNORD105B-201ENST00000458770 79 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 RPS27AP1-201ENST00000475545 471 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC114967.1-201ENST00000504890 259 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms