Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP11P51784 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP11P51784 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP11P51784 Y_RNA.234-201ENST00000364409 97 ntBASIC5.4□□□□□ -1.54
USP11P51784 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP11P51784 RNU6-1040P-201ENST00000383974 107 ntBASIC5.4□□□□□ -1.54
USP11P51784 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP11P51784 AL590762.2-201ENST00000395798 571 ntBASIC5.4□□□□□ -1.54
USP11P51784 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.4□□□□□ -1.54
USP11P51784 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.4□□□□□ -1.54
USP11P51784 E2F6P2-201ENST00000420708 748 ntBASIC5.4□□□□□ -1.54
USP11P51784 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 AC096644.2-201ENST00000429278 159 ntBASIC5.4□□□□□ -1.54
USP11P51784 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 FTH1P1-201ENST00000437933 532 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC016831.4-201ENST00000438302 307 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC004938.1-201ENST00000438468 308 ntBASIC5.4□□□□□ -1.54
USP11P51784 HMGB1P12-201ENST00000438594 598 ntBASIC5.4□□□□□ -1.54
USP11P51784 AF228730.2-201ENST00000438784 848 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.4□□□□□ -1.54
USP11P51784 MTND1P17-201ENST00000448961 204 ntBASIC5.4□□□□□ -1.54
USP11P51784 HMGB1P15-201ENST00000453854 435 ntBASIC5.4□□□□□ -1.54
USP11P51784 AL162395.1-201ENST00000457882 422 ntBASIC5.4□□□□□ -1.54
USP11P51784 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 IGLV2-34-201ENST00000490007 283 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC116562.3-201ENST00000506136 177 ntBASIC5.4□□□□□ -1.54
USP11P51784 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 AC026801.2-201ENST00000515352 425 ntBASIC5.4□□□□□ -1.54
USP11P51784 SNORA25.10-201ENST00000515926 124 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC068587.5-201ENST00000528506 175 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.4□□□□□ -1.54
USP11P51784 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.4□□□□□ -1.54
USP11P51784 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 LSM6P2-201ENST00000552208 177 ntBASIC5.4□□□□□ -1.54
USP11P51784 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP11P51784 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.4□□□□□ -1.54
USP11P51784 AC104662.1-201ENST00000604448 511 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC245517.5-201ENST00000611529 162 ntBASIC5.4□□□□□ -1.54
USP11P51784 AC243654.2-201ENST00000612843 443 ntBASIC5.4□□□□□ -1.54
USP11P51784 AL390240.1-201ENST00000612950 384 ntBASIC5.4□□□□□ -1.54
USP11P51784 MIR6853-201ENST00000619642 74 ntBASIC5.4□□□□□ -1.54
USP11P51784 AP001642.1-201ENST00000624727 2117 ntBASIC5.4□□□□□ -1.54
USP11P51784 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.4□□□□□ -1.54
USP11P51784 AC097714.1-201ENST00000511272 1647 ntBASIC5.4□□□□□ -1.55
USP11P51784 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.4□□□□□ -1.55
USP11P51784 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP11P51784 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.4□□□□□ -1.55
USP11P51784 XPOTP1-201ENST00000443317 2398 ntBASIC5.4□□□□□ -1.55
USP11P51784 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP11P51784 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP11P51784 AC011460.1-201ENST00000636268 1834 ntBASIC5.39□□□□□ -1.55
USP11P51784 Z95331.1-201ENST00000623075 23112 ntBASIC5.39□□□□□ -1.55
USP11P51784 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP11P51784 Y_RNA.574-201ENST00000384766 95 ntBASIC5.39□□□□□ -1.55
USP11P51784 RPS4XP9-201ENST00000405151 780 ntBASIC5.39□□□□□ -1.55
USP11P51784 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.39□□□□□ -1.55
USP11P51784 OR6C66P-201ENST00000414917 930 ntBASIC5.39□□□□□ -1.55
USP11P51784 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.39□□□□□ -1.55
USP11P51784 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.39□□□□□ -1.55
USP11P51784 MED13P1-201ENST00000428342 171 ntBASIC5.39□□□□□ -1.55
USP11P51784 AL359265.2-201ENST00000434367 631 ntBASIC5.39□□□□□ -1.55
USP11P51784 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.39□□□□□ -1.55
USP11P51784 RPL21P89-201ENST00000444021 467 ntBASIC5.39□□□□□ -1.55
USP11P51784 Y_RNA.654-201ENST00000497848 106 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 RNU6-256P-201ENST00000516747 97 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.39□□□□□ -1.55
USP11P51784 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.39□□□□□ -1.55
USP11P51784 MIR4270-201ENST00000581799 70 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC069061.3-201ENST00000582254 823 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.39□□□□□ -1.55
USP11P51784 PSMA6P4-201ENST00000603247 718 ntBASIC5.39□□□□□ -1.55
USP11P51784 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 AL355816.1-201ENST00000607951 118 ntBASIC5.39□□□□□ -1.55
USP11P51784 AL031666.3-201ENST00000609320 1006 ntBASIC5.39□□□□□ -1.55
USP11P51784 CR392039.4-201ENST00000624968 501 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC008013.2-202ENST00000637965 364 ntBASIC5.39□□□□□ -1.55
USP11P51784 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 PNPT1P2-201ENST00000456768 2050 ntBASIC5.39□□□□□ -1.55
USP11P51784 AC244517.1-201ENST00000606030 2086 ntBASIC5.39□□□□□ -1.55
USP11P51784 AL031595.2-201ENST00000624215 19071 ntBASIC5.39□□□□□ -1.55
USP11P51784 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP11P51784 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
USP11P51784 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 MTND5P28-201ENST00000438005 1594 ntBASIC5.38□□□□□ -1.55
USP11P51784 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.38□□□□□ -1.55
USP11P51784 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms