Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
TM4SF4P48230 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF4P48230 MTND5P33-201ENST00000571250 1450 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF4P48230 Y_RNA.46-201ENST00000362695 102 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF4P48230 MIR135A2-201ENST00000384854 100 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 SNORA40.3-201ENST00000390964 122 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 UBA52P6-201ENST00000399822 382 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 Y_RNA.608-201ENST00000410647 95 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 RNU2-71P-201ENST00000411395 189 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF4P48230 SPA17P1-201ENST00000416656 452 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 TOMM22P1-201ENST00000418578 312 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC010153.1-201ENST00000432862 727 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC004866.2-201ENST00000438285 481 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF4P48230 AL033528.1-201ENST00000453780 140 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 FGF7P3-201ENST00000454645 303 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TM4SF4P48230 RPL23AP55-201ENST00000498163 452 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF4P48230 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.32□□□□□ -1.72
TM4SF4P48230 IGKV2D-23-201ENST00000518179 286 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.32□□□□□ -1.72
TM4SF4P48230 OR5D17P-201ENST00000531492 978 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.32□□□□□ -1.72
TM4SF4P48230 ZNF519P3-201ENST00000557158 1032 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC009101.1-201ENST00000568135 242 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC012414.6-201ENST00000568241 401 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AP005136.1-201ENST00000579765 429 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC005771.1-201ENST00000585581 349 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC119751.7-201ENST00000600494 245 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 uc_338.32-201ENST00000615087 172 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.32□□□□□ -1.72
TM4SF4P48230 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF4P48230 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TM4SF4P48230 DDX10P1-201ENST00000448545 1933 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.32□□□□□ -1.72
TM4SF4P48230 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF4P48230 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 AC116096.1-201ENST00000566804 2314 ntBASIC4.32□□□□□ -1.72
TM4SF4P48230 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TM4SF4P48230 AC007823.1-201ENST00000569932 1566 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF4P48230 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF4P48230 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF4P48230 SNORD96B-201ENST00000386148 79 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 RNU6-278P-201ENST00000390945 109 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 SNORD115.1-201ENST00000391109 76 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 RPL7P25-201ENST00000404151 721 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 RNU4-65P-201ENST00000410473 140 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 RNU2-8P-201ENST00000410727 190 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF4P48230 SSXP9-201ENST00000417503 292 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AC016907.1-201ENST00000419483 435 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AL353777.1-201ENST00000425552 326 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 MTND1P28-201ENST00000435623 950 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF4P48230 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF4P48230 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 CFTRP1-201ENST00000456646 183 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AC096751.1-202ENST00000502691 1067 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 VWA8P1-201ENST00000510889 176 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 RN7SKP46-201ENST00000515942 234 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF4P48230 AC090281.1-201ENST00000523019 276 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF4P48230 GNRHR2P1-201ENST00000555315 631 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 MIR3682-201ENST00000581338 84 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.31□□□□□ -1.72
TM4SF4P48230 MIR3611-201ENST00000584484 83 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF4P48230 MIR7851-201ENST00000610611 160 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
TM4SF4P48230 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
TM4SF4P48230 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF4P48230 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF4P48230 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF4P48230 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF4P48230 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF4P48230 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF4P48230 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF4P48230 RNU6-50P-201ENST00000362356 103 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 RNU6-223P-201ENST00000362830 107 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 MIR195-201ENST00000385194 87 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TM4SF4P48230 U3.19-201ENST00000390893 196 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.3□□□□□ -1.72
TM4SF4P48230 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.3□□□□□ -1.72
TM4SF4P48230 AC245054.1-201ENST00000420944 258 ntBASIC4.3□□□□□ -1.72
TM4SF4P48230 USP9YP36-201ENST00000424581 829 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms