Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
BRCC3P46736 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCC3P46736 RNU6-157P-201ENST00000383957 107 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 RNU6-629P-201ENST00000384061 103 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 MIR591-201ENST00000385290 95 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 RNU6-757P-201ENST00000410334 100 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC005005.2-201ENST00000420779 380 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.23□□□□□ -1.89
BRCC3P46736 AL035410.1-201ENST00000427409 427 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC107083.1-201ENST00000439643 279 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.23□□□□□ -1.89
BRCC3P46736 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 MTND1P31-201ENST00000449206 961 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCC3P46736 snoU109.4-201ENST00000458953 143 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC068587.2-201ENST00000478386 781 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 NCOR1P1-202ENST00000486162 291 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 MTCYBP17-201ENST00000503579 789 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC093767.1-201ENST00000504523 156 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC079395.1-201ENST00000510981 262 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AP000889.1-201ENST00000530968 660 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.23□□□□□ -1.89
BRCC3P46736 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC125611.1-201ENST00000549563 229 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCC3P46736 RPL23AP92-201ENST00000603609 255 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCC3P46736 AC231759.1-201ENST00000616455 597 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC109809.1-201ENST00000619665 545 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC097520.1-201ENST00000624435 385 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 AC017037.3-201ENST00000625016 472 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
BRCC3P46736 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCC3P46736 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 SNRPEP3-201ENST00000338402 276 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 RNU6-216P-201ENST00000363282 104 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 U3.29-201ENST00000391296 212 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC016769.3-201ENST00000396562 315 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 RNU2-28P-201ENST00000410457 189 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 HMGB1P49-201ENST00000418882 569 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC010099.3-201ENST00000423896 409 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCC3P46736 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.22□□□□□ -1.89
BRCC3P46736 MTND1P32-201ENST00000433043 938 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCC3P46736 MTCYBP11-201ENST00000447254 1109 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AL445669.2-201ENST00000454425 421 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCC3P46736 HMGB1P28-201ENST00000507778 552 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.22□□□□□ -1.89
BRCC3P46736 RNU5A-4P-201ENST00000516588 111 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 HIGD1AP17-201ENST00000554576 276 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCC3P46736 MTND3P12-201ENST00000559068 328 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 MIR3690-201ENST00000580266 75 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.22□□□□□ -1.89
BRCC3P46736 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCC3P46736 AL353778.1-201ENST00000603149 408 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AL139344.1-201ENST00000605228 195 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC092650.2-201ENST00000619984 902 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC007318.2-201ENST00000620999 243 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC092184.1-201ENST00000625042 715 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCC3P46736 CYP3A51P-201ENST00000633513 256 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 AP001350.1-201ENST00000601906 1524 ntBASIC3.22□□□□□ -1.89
BRCC3P46736 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
BRCC3P46736 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCC3P46736 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
BRCC3P46736 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.21□□□□□ -1.89
BRCC3P46736 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRCC3P46736 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
BRCC3P46736 MTCO1P23-201ENST00000415223 1526 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 Y_RNA.25-201ENST00000362528 102 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 RNA5SP258-201ENST00000362750 119 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 SKINT1L-201ENST00000401057 817 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCC3P46736 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCC3P46736 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
BRCC3P46736 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 MTCO2P21-201ENST00000419780 677 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms