Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL163153.1-201ENST00000554223 283 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.32□□□□□ -1.88
VCLP18206 AC055876.1-202ENST00000567053 138 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC015917.1-201ENST00000579654 510 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
VCLP18206 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.32□□□□□ -1.88
VCLP18206 BNIP3P22-201ENST00000593399 556 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC008962.1-201ENST00000605729 304 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC080013.3-201ENST00000606839 578 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC002076.2-201ENST00000617362 122 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC006386.1-201ENST00000619436 415 ntBASIC3.32□□□□□ -1.88
VCLP18206 AL356321.1-201ENST00000621360 228 ntBASIC3.32□□□□□ -1.88
VCLP18206 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.32□□□□□ -1.88
VCLP18206 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.32□□□□□ -1.88
VCLP18206 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VCLP18206 DDX43P2-201ENST00000604753 1354 ntBASIC3.32□□□□□ -1.88
VCLP18206 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VCLP18206 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VCLP18206 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.31□□□□□ -1.88
VCLP18206 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 CUL1P1-201ENST00000509510 2425 ntBASIC3.31□□□□□ -1.88
VCLP18206 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VCLP18206 AC009812.4-201ENST00000569134 1805 ntBASIC3.31□□□□□ -1.88
VCLP18206 AP000776.1-201ENST00000530032 1663 ntBASIC3.31□□□□□ -1.88
VCLP18206 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
VCLP18206 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VCLP18206 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.31□□□□□ -1.88
VCLP18206 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.31□□□□□ -1.88
VCLP18206 THAP5P1-201ENST00000439089 262 ntBASIC3.31□□□□□ -1.88
VCLP18206 MTND3P1-201ENST00000441336 220 ntBASIC3.31□□□□□ -1.88
VCLP18206 MTND5P14-201ENST00000441481 1267 ntBASIC3.31□□□□□ -1.88
VCLP18206 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.31□□□□□ -1.88
VCLP18206 AL592447.1-201ENST00000447592 540 ntBASIC3.31□□□□□ -1.88
VCLP18206 USP9YP10-201ENST00000454868 628 ntBASIC3.31□□□□□ -1.88
VCLP18206 MEMO1P3-201ENST00000459811 302 ntBASIC3.31□□□□□ -1.88
VCLP18206 AC104563.1-201ENST00000476147 376 ntBASIC3.31□□□□□ -1.88
VCLP18206 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
VCLP18206 AL358832.1-201ENST00000497800 389 ntBASIC3.31□□□□□ -1.88
VCLP18206 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.31□□□□□ -1.88
VCLP18206 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.31□□□□□ -1.88
VCLP18206 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.31□□□□□ -1.88
VCLP18206 COX6CP8-201ENST00000522620 226 ntBASIC3.31□□□□□ -1.88
VCLP18206 DEFB108D-201ENST00000527787 222 ntBASIC3.31□□□□□ -1.88
VCLP18206 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.31□□□□□ -1.88
VCLP18206 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.31□□□□□ -1.88
VCLP18206 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
VCLP18206 AC004832.5-201ENST00000608677 401 ntBASIC3.31□□□□□ -1.88
VCLP18206 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
VCLP18206 AP001002.2-201ENST00000625137 386 ntBASIC3.31□□□□□ -1.88
VCLP18206 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
VCLP18206 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCLP18206 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VCLP18206 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
VCLP18206 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
VCLP18206 AC010733.2-201ENST00000589496 5702 ntBASIC3.3□□□□□ -1.88
VCLP18206 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VCLP18206 Y_RNA.234-201ENST00000364409 97 ntBASIC3.3□□□□□ -1.88
VCLP18206 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
VCLP18206 FAT1P1-201ENST00000406588 507 ntBASIC3.3□□□□□ -1.88
VCLP18206 U3.42-201ENST00000408746 214 ntBASIC3.3□□□□□ -1.88
VCLP18206 ELOCP9-201ENST00000418624 239 ntBASIC3.3□□□□□ -1.88
VCLP18206 AC006960.1-201ENST00000419980 153 ntBASIC3.3□□□□□ -1.88
VCLP18206 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VCLP18206 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
VCLP18206 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 RNA5SP310-201ENST00000459084 116 ntBASIC3.3□□□□□ -1.88
VCLP18206 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
VCLP18206 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
VCLP18206 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VCLP18206 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 AL359273.1-201ENST00000510918 627 ntBASIC3.3□□□□□ -1.88
VCLP18206 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 RNU6-311P-201ENST00000516224 102 ntBASIC3.3□□□□□ -1.88
VCLP18206 FAM60DP-201ENST00000524174 632 ntBASIC3.3□□□□□ -1.88
VCLP18206 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.3□□□□□ -1.88
VCLP18206 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.3□□□□□ -1.88
VCLP18206 MTND4P33-201ENST00000556706 766 ntBASIC3.3□□□□□ -1.88
VCLP18206 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms