Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC090666.1-201ENST00000578241 445 ntBASIC2.91□□□□□ -1.94
RETP07949 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.91□□□□□ -1.94
RETP07949 AL139022.2-201ENST00000606934 443 ntBASIC2.91□□□□□ -1.94
RETP07949 AC144521.1-201ENST00000607148 956 ntBASIC2.91□□□□□ -1.94
RETP07949 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.91□□□□□ -1.94
RETP07949 AC069234.5-201ENST00000611056 416 ntBASIC2.91□□□□□ -1.94
RETP07949 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.91□□□□□ -1.94
RETP07949 AL110115.1-201ENST00000614396 364 ntBASIC2.91□□□□□ -1.94
RETP07949 AC002076.2-201ENST00000617362 122 ntBASIC2.91□□□□□ -1.94
RETP07949 AC022306.3-201ENST00000619930 550 ntBASIC2.91□□□□□ -1.94
RETP07949 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.91□□□□□ -1.94
RETP07949 MTND5P31-201ENST00000419366 1374 ntBASIC2.9□□□□□ -1.94
RETP07949 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.9□□□□□ -1.94
RETP07949 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RETP07949 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RETP07949 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
RETP07949 Y_RNA.493-201ENST00000384422 102 ntBASIC2.9□□□□□ -1.95
RETP07949 SSXP10-201ENST00000402595 565 ntBASIC2.9□□□□□ -1.95
RETP07949 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.9□□□□□ -1.95
RETP07949 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
RETP07949 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.9□□□□□ -1.95
RETP07949 AL390023.1-201ENST00000428836 262 ntBASIC2.9□□□□□ -1.95
RETP07949 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.9□□□□□ -1.95
RETP07949 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
RETP07949 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
RETP07949 HSPE1P6-201ENST00000479457 291 ntBASIC2.9□□□□□ -1.95
RETP07949 GAPDHP39-201ENST00000481866 979 ntBASIC2.9□□□□□ -1.95
RETP07949 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RETP07949 RNA5SP24-201ENST00000516478 95 ntBASIC2.9□□□□□ -1.95
RETP07949 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.9□□□□□ -1.95
RETP07949 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.9□□□□□ -1.95
RETP07949 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
RETP07949 CYB5AP5-201ENST00000549779 389 ntBASIC2.9□□□□□ -1.95
RETP07949 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RETP07949 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.9□□□□□ -1.95
RETP07949 SNORD39.3-201ENST00000584451 71 ntBASIC2.9□□□□□ -1.95
RETP07949 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.9□□□□□ -1.95
RETP07949 AC007275.1-201ENST00000621243 671 ntBASIC2.9□□□□□ -1.95
RETP07949 AC064859.1-201ENST00000624741 174 ntBASIC2.9□□□□□ -1.95
RETP07949 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.9□□□□□ -1.95
RETP07949 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RETP07949 AC138915.1-201ENST00000565427 1685 ntBASIC2.89□□□□□ -1.95
RETP07949 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 RNU5B-1-201ENST00000363286 116 ntBASIC2.89□□□□□ -1.95
RETP07949 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
RETP07949 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
RETP07949 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 MIR34A-201ENST00000385130 110 ntBASIC2.89□□□□□ -1.95
RETP07949 MIR620-201ENST00000385232 95 ntBASIC2.89□□□□□ -1.95
RETP07949 RNU6-1000P-201ENST00000391066 106 ntBASIC2.89□□□□□ -1.95
RETP07949 AL603865.2-201ENST00000401679 213 ntBASIC2.89□□□□□ -1.95
RETP07949 RNA5SP56-201ENST00000410277 118 ntBASIC2.89□□□□□ -1.95
RETP07949 RNU6-575P-201ENST00000411326 105 ntBASIC2.89□□□□□ -1.95
RETP07949 SSXP9-201ENST00000417503 292 ntBASIC2.89□□□□□ -1.95
RETP07949 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.89□□□□□ -1.95
RETP07949 AC003685.2-201ENST00000422795 395 ntBASIC2.89□□□□□ -1.95
RETP07949 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.89□□□□□ -1.95
RETP07949 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
RETP07949 AC093801.2-201ENST00000503966 1050 ntBASIC2.89□□□□□ -1.95
RETP07949 AC006445.2-201ENST00000510061 472 ntBASIC2.89□□□□□ -1.95
RETP07949 OR5G4P-201ENST00000525251 760 ntBASIC2.89□□□□□ -1.95
RETP07949 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.89□□□□□ -1.95
RETP07949 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RETP07949 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
RETP07949 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 AC090695.1-201ENST00000561269 1222 ntBASIC2.89□□□□□ -1.95
RETP07949 ZNF971P-201ENST00000562068 1249 ntBASIC2.89□□□□□ -1.95
RETP07949 AC023825.1-201ENST00000566704 1030 ntBASIC2.89□□□□□ -1.95
RETP07949 AC022069.1-201ENST00000582910 658 ntBASIC2.89□□□□□ -1.95
RETP07949 AC008507.2-201ENST00000588402 1176 ntBASIC2.89□□□□□ -1.95
RETP07949 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.89□□□□□ -1.95
RETP07949 AP002906.1-201ENST00000603405 233 ntBASIC2.89□□□□□ -1.95
RETP07949 AC019159.1-201ENST00000605094 187 ntBASIC2.89□□□□□ -1.95
RETP07949 AC097504.2-201ENST00000608088 454 ntBASIC2.89□□□□□ -1.95
RETP07949 AC124016.2-201ENST00000610058 665 ntBASIC2.89□□□□□ -1.95
RETP07949 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
RETP07949 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.89□□□□□ -1.95
RETP07949 AC068620.4-201ENST00000636730 1182 ntBASIC2.89□□□□□ -1.95
RETP07949 AC006927.2-201ENST00000639256 389 ntBASIC2.89□□□□□ -1.95
RETP07949 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.89□□□□□ -1.95
RETP07949 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
RETP07949 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
RETP07949 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RETP07949 ZNF734P-201ENST00000419494 1534 ntBASIC2.88□□□□□ -1.95
RETP07949 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
RETP07949 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RETP07949 SGO1P1-201ENST00000603525 1447 ntBASIC2.88□□□□□ -1.95
RETP07949 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RETP07949 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
RETP07949 XGY1-201ENST00000381172 446 ntBASIC2.88□□□□□ -1.95
RETP07949 RNU6-921P-201ENST00000384361 107 ntBASIC2.88□□□□□ -1.95
RETP07949 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
RETP07949 MIR16-1-201ENST00000385271 89 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms