Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 MTND5P26-201ENST00000426018 1752 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 RPS3AP3-201ENST00000411933 242 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 MTATP6P27-201ENST00000416987 621 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 EIF1P1-201ENST00000421436 341 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AL445669.1-201ENST00000426743 755 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AP000542.1-201ENST00000448473 371 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 Z82190.1-201ENST00000454534 490 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC087312.1-201ENST00000471411 480 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC034222.1-201ENST00000494052 532 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC105252.1-201ENST00000503089 286 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC016065.2-201ENST00000514530 444 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 ZNF519P2-201ENST00000557032 169 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC007566.2-201ENST00000603642 413 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC090578.1-201ENST00000604955 591 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC068944.2-201ENST00000610373 403 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 U4.5-201ENST00000617137 123 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC004009.2-201ENST00000623016 728 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 AC110801.1-201ENST00000623590 212 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 SRP72P2-201ENST00000344851 1979 ntBASIC5.36□□□□□ -1.55
RAPGEF3O95398 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAPGEF3O95398 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAPGEF3O95398 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 AL161781.1-201ENST00000354277 403 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 MIR449A-201ENST00000362113 91 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AL357075.1-201ENST00000404107 726 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AL139095.1-201ENST00000404326 391 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 RPS15AP40-201ENST00000419621 391 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 NANOGP6-201ENST00000429190 847 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 RABEPKP1-201ENST00000440529 1026 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC093392.2-201ENST00000450682 337 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC098824.1-201ENST00000453565 980 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 MTCO1P42-201ENST00000457379 726 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AP001025.2-201ENST00000490908 477 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC006445.1-201ENST00000491925 405 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 TXNP6-201ENST00000510190 310 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAPGEF3O95398 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC137800.2-201ENST00000574375 120 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 MIR3682-201ENST00000581338 84 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.35□□□□□ -1.55
RAPGEF3O95398 MIR3945-201ENST00000581853 98 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 AC009977.1-201ENST00000586015 570 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 CKS1BP3-201ENST00000600888 237 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 MIR6715A-201ENST00000615929 79 ntBASIC5.35□□□□□ -1.55
RAPGEF3O95398 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAPGEF3O95398 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAPGEF3O95398 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAPGEF3O95398 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC092447.10-201ENST00000620607 1652 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.34□□□□□ -1.55
RAPGEF3O95398 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAPGEF3O95398 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms