Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF40O75150 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF40O75150 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF40O75150 AC008555.7-201ENST00000605008 583 ntBASIC6.32□□□□□ -1.4
RNF40O75150 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RNF40O75150 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 RPL21P75-201ENST00000396599 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 RPL21P28-201ENST00000401418 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC245096.1-201ENST00000413104 546 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AL590556.1-201ENST00000423231 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 RPS6P12-201ENST00000432491 726 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC138761.5-201ENST00000433967 325 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF40O75150 RPL21P11-201ENST00000461458 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 RPL21P39-201ENST00000463605 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC132942.1-201ENST00000486753 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC093591.1-201ENST00000491435 481 ntBASIC6.31□□□□□ -1.4
RNF40O75150 RPL21P16-201ENST00000495531 483 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF40O75150 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF40O75150 MTND3P25-201ENST00000509243 135 ntBASIC6.31□□□□□ -1.4
RNF40O75150 SCARNA18.1-201ENST00000516330 83 ntBASIC6.31□□□□□ -1.4
RNF40O75150 RN7SKP60-201ENST00000516985 239 ntBASIC6.31□□□□□ -1.4
RNF40O75150 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.31□□□□□ -1.4
RNF40O75150 AC025755.1-201ENST00000521306 278 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AP006245.1-201ENST00000522549 120 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC007458.1-201ENST00000542812 373 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF40O75150 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF40O75150 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF40O75150 MIR4282-201ENST00000583613 67 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC025588.3-201ENST00000604182 274 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AC006329.2-201ENST00000611491 394 ntBASIC6.31□□□□□ -1.4
RNF40O75150 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF40O75150 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF40O75150 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
RNF40O75150 AP001148.1-201ENST00000624124 2359 ntBASIC6.31□□□□□ -1.4
RNF40O75150 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF40O75150 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF40O75150 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF40O75150 RBMY1HP-201ENST00000382759 1389 ntBASIC6.31□□□□□ -1.4
RNF40O75150 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RNF40O75150 RNA5SP242-201ENST00000364171 118 ntBASIC6.3□□□□□ -1.4
RNF40O75150 RN7SKP128-201ENST00000364270 303 ntBASIC6.3□□□□□ -1.4
RNF40O75150 U3.13-201ENST00000364804 214 ntBASIC6.3□□□□□ -1.4
RNF40O75150 Y_RNA.435-201ENST00000384095 112 ntBASIC6.3□□□□□ -1.4
RNF40O75150 Y_RNA.441-201ENST00000384123 112 ntBASIC6.3□□□□□ -1.4
RNF40O75150 Y_RNA.504-201ENST00000384481 104 ntBASIC6.3□□□□□ -1.4
RNF40O75150 AL079342.1-201ENST00000401460 267 ntBASIC6.3□□□□□ -1.4
RNF40O75150 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF40O75150 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
RNF40O75150 AC007389.2-201ENST00000434630 306 ntBASIC6.3□□□□□ -1.4
RNF40O75150 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF40O75150 RN7SL177P-201ENST00000476596 299 ntBASIC6.3□□□□□ -1.4
RNF40O75150 RN7SL193P-201ENST00000491708 276 ntBASIC6.3□□□□□ -1.4
RNF40O75150 SNORA70.11-201ENST00000515987 138 ntBASIC6.3□□□□□ -1.4
RNF40O75150 SNORA70.13-201ENST00000516116 138 ntBASIC6.3□□□□□ -1.4
RNF40O75150 RNU6-352P-201ENST00000516908 107 ntBASIC6.3□□□□□ -1.4
RNF40O75150 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF40O75150 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF40O75150 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF40O75150 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF40O75150 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 MTND5P9-201ENST00000503854 1755 ntBASIC6.3□□□□□ -1.4
RNF40O75150 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 AC005261.2-201ENST00000593427 4258 ntBASIC6.3□□□□□ -1.4
RNF40O75150 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.3□□□□□ -1.4
RNF40O75150 PARP4P2-201ENST00000446672 3326 ntBASIC6.3□□□□□ -1.4
RNF40O75150 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF40O75150 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RNF40O75150 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RNF40O75150 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
RNF40O75150 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms