Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 MAPK10-263ENST00000641052 4307 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RNU6-1155P-201ENST00000363554 107 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 Y_RNA.158-201ENST00000363651 101 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 SNORA23-201ENST00000365128 182 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 SNORA2.3-201ENST00000383920 135 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 Y_RNA.401-201ENST00000383965 117 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 Y_RNA.605-201ENST00000410577 105 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 E2F6P2-201ENST00000420708 748 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RPL21P109-201ENST00000422213 475 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 NEFMP1-201ENST00000443423 1006 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC073264.2-201ENST00000448886 166 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AP001086.1-201ENST00000494882 321 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC097473.1-201ENST00000508142 408 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RNU2-69P-201ENST00000516061 100 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RNU6-1095P-201ENST00000516148 108 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RNU6-1213P-201ENST00000517075 94 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 RNU1-54P-201ENST00000517181 120 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC027369.5-201ENST00000533838 755 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AP006289.1-201ENST00000538089 277 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 MTCO3P23-201ENST00000561363 289 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 MIR378J-201ENST00000611988 109 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 MIR7703-201ENST00000620784 77 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 PLCE1P1-201ENST00000622094 305 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC022418.1-201ENST00000624118 445 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 OR9K1P-202ENST00000641111 3217 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 AC140134.1-201ENST00000511830 3544 ntBASIC5.84□□□□□ -1.47
USP17L11C9JVI0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USP17L11C9JVI0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP17L11C9JVI0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.84□□□□□ -1.48
USP17L11C9JVI0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RNU6-715P-201ENST00000365204 103 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 MIR135A2-201ENST00000384854 100 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 SNORA48.4-201ENST00000391089 134 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AL583834.1-201ENST00000406943 343 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RNU4-78P-201ENST00000410940 126 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 MCFD2P1-201ENST00000417812 300 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AL138785.1-201ENST00000425821 331 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC009238.2-201ENST00000431026 355 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC004866.2-201ENST00000438285 481 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RN7SL481P-201ENST00000477764 299 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RNU6-352P-201ENST00000516908 107 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 Y_RNA.708-201ENST00000516950 96 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC105031.1-201ENST00000518550 476 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RAB9BP1-201ENST00000519581 626 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AP003122.3-201ENST00000526316 255 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 MIR4680-201ENST00000580906 66 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AC087588.2-201ENST00000617667 426 ntBASIC5.83□□□□□ -1.48
USP17L11C9JVI0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L11C9JVI0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L11C9JVI0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
USP17L11C9JVI0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
USP17L11C9JVI0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
USP17L11C9JVI0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L11C9JVI0 AC099654.2-201ENST00000433031 1980 ntBASIC5.82□□□□□ -1.48
USP17L11C9JVI0 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.82□□□□□ -1.48
USP17L11C9JVI0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.82□□□□□ -1.48
USP17L11C9JVI0 SAMMSON-226ENST00000642089 1582 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms