Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RN7SL214P-201ENST00000487317 265 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 MRPS33P2-201ENST00000507850 322 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 OR51K1P-201ENST00000510214 950 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 RNU6-914P-201ENST00000516749 109 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 AC136777.2-201ENST00000522979 358 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 DEFB108E-201ENST00000524692 240 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 AP000648.1-201ENST00000529682 397 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 TRAV32-201ENST00000553993 340 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 SNORD95-201ENST00000579879 68 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 MIR4776-2-201ENST00000580204 80 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 FAM27E4-201ENST00000605259 342 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 RN7SL787P-201ENST00000613000 284 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 PARP4P2-201ENST00000446672 3326 ntBASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HRH3Q9Y5N1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 Y_RNA.83-201ENST00000363005 113 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RNU4-44P-201ENST00000363050 141 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 SNORD81.1-201ENST00000363064 77 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 U3.13-201ENST00000364804 214 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 U8.8-201ENST00000365399 135 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RNA5SP211-201ENST00000365516 117 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RNU6-187P-201ENST00000384139 106 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RPL23AP25-201ENST00000430973 463 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC064862.4-201ENST00000442180 334 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 Y_RNA.644-201ENST00000459006 113 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 Y_RNA.674-201ENST00000516362 113 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 SNORA25.14-201ENST00000516481 132 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 RPL23AP87-202ENST00000573039 466 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC243829.7-201ENST00000633081 225 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AL450472.1-202ENST00000637286 180 ntBASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.43□□□□□ -1.54
HRH3Q9Y5N1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 AC012254.3-201ENST00000591183 2117 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 ZNF285B-201ENST00000561698 1767 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 RPL9P7-201ENST00000330965 580 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 Y_RNA.27-201ENST00000362540 103 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 Y_RNA.277-201ENST00000364754 102 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 MIR135A2-201ENST00000384854 100 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 MIR1298-201ENST00000408783 112 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 AC063979.1-201ENST00000415539 377 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 AL591043.1-201ENST00000432461 424 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 AL159987.2-201ENST00000432754 307 ntBASIC5.42□□□□□ -1.54
HRH3Q9Y5N1 AL513043.1-201ENST00000439124 535 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms