Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC010307.1-201ENST00000467206 836 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC026436.1-201ENST00000510537 270 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 HMGB1P5-201ENST00000255320 642 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 RPS29P6-201ENST00000438196 145 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SCARNA1-201ENST00000517138 166 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 TGIF1P1-201ENST00000558095 802 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC020661.2-201ENST00000560114 134 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 MIR98-201ENST00000606724 119 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL355493.4-201ENST00000618530 292 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SNORD114-3-201ENST00000364969 75 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC004987.3-201ENST00000413879 771 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL034379.1-201ENST00000423216 253 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC021146.5-201ENST00000503544 545 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 FAM106DP-201ENST00000586416 501 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC006001.4-201ENST00000622243 395 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC138965.3-201ENST00000623875 498 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC073476.4-201ENST00000628409 72 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 MIR513A2-201ENST00000385249 127 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 RPL31P1-201ENST00000398116 372 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC00888-204ENST00000487386 421 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SNORA25.15-201ENST00000516487 89 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 APOOP3-201ENST00000536787 586 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 SULT1C2P2-201ENST00000562517 294 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 uc_338.14-201ENST00000613162 166 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 ELL2P4-201ENST00000446870 1376 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL445669.1-201ENST00000426743 755 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 BTF3L4P4-201ENST00000506381 449 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC008638.3-201ENST00000603341 463 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC008432.1-201ENST00000615912 1320 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 Y_RNA.55-201ENST00000362797 102 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AL162578.1-201ENST00000406202 378 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.89□□□□□ -2.27
MACF1Q9UPN3 UBE2Q2P2-203ENST00000613592 761 ntBASIC0.89□□□□□ -2.27
MACF1Q9UPN3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 RNA5SP52-201ENST00000362448 134 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 RNU4-41P-201ENST00000364426 143 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 RNU1-139P-201ENST00000391307 165 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 RN7SL633P-201ENST00000488974 297 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 U3.6-201ENST00000363622 211 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC006116.7-201ENST00000590141 756 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AL590399.6-201ENST00000446396 307 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC073901.1-201ENST00000462471 408 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MIR3605-201ENST00000583214 100 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 Y_RNA.783-201ENST00000613546 102 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC009452.1-201ENST00000640823 606 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 CR848007.1-201ENST00000442354 1699 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MIR9-3-201ENST00000385084 90 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC002075.2-201ENST00000425207 252 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC099560.2-201ENST00000457554 255 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 EIF2S2P4-201ENST00000461070 984 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms