Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLCF1Q9UBD9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.71□□□□□ -1.98
CLCF1Q9UBD9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLCF1Q9UBD9 AC093010.3-201ENST00000570269 15214 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AP002907.1-201ENST00000606361 1430 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MIR634-201ENST00000385208 97 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 RNA5SP80-201ENST00000410475 111 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MTND2P5-201ENST00000432656 1006 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC097462.2-201ENST00000504623 481 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 COX7A2P2-201ENST00000505291 250 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 KLHL2P1-201ENST00000508691 521 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC008837.2-201ENST00000513076 418 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 RNU6-583P-201ENST00000516012 92 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 RNA5SP380-201ENST00000517190 98 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC004987.4-201ENST00000603383 338 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC107294.3-201ENST00000609211 526 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AL157392.4-201ENST00000609756 345 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 VIS1.1-201ENST00000610517 203 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AL355810.1-201ENST00000614629 552 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 AC004009.2-201ENST00000623016 728 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MTND4P34-201ENST00000572715 1371 ntBASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCF1Q9UBD9 MTND5P24-201ENST00000438892 1767 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC097714.1-201ENST00000511272 1647 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNA5SP383-201ENST00000362934 120 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNU4-68P-201ENST00000364314 141 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 Y_RNA.408-201ENST00000383987 102 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 ERHP2-201ENST00000402323 299 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RPL5P18-201ENST00000406671 891 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNU4-65P-201ENST00000410473 140 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNA5SP293-201ENST00000410527 113 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNU4-22P-201ENST00000411058 166 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC068533.2-201ENST00000411872 306 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RPL32P35-201ENST00000415214 394 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL356320.2-201ENST00000417263 507 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC106883.1-201ENST00000418805 562 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC006960.1-201ENST00000419980 153 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 EZH2P1-201ENST00000431167 291 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL590103.1-201ENST00000434488 307 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 MUPP-201ENST00000438111 566 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 ZNF886P-201ENST00000450781 723 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 TRGVB-201ENST00000453257 471 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 MTCO3P11-201ENST00000455103 774 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RPL7P5-201ENST00000471472 736 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 TMEM251P1-201ENST00000503717 318 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 UBE2V1P12-201ENST00000503954 474 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 RNU1-61P-201ENST00000516107 151 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 SCARNA1-201ENST00000517138 166 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC024224.1-201ENST00000538284 609 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 SETP7-201ENST00000552169 453 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 OR4T1P-201ENST00000554933 911 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 LARP7P3-201ENST00000579888 337 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC025588.4-201ENST00000615802 908 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL356585.4-201ENST00000623078 1229 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 AL035425.3-201ENST00000564206 4996 ntBASIC2.69□□□□□ -1.98
CLCF1Q9UBD9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 RNA5SP295-201ENST00000362655 121 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 U3.26-201ENST00000391236 204 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL122016.1-201ENST00000403365 367 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms