Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC008521.1-201ENST00000587471 187 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AL138889.2-201ENST00000603883 242 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 SNHG22-203ENST00000617833 660 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 EIF2AP4-201ENST00000424793 1781 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 Y_RNA.80-201ENST00000362996 102 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 Y_RNA.188-201ENST00000363952 111 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 SNORA2.3-201ENST00000383920 135 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 Y_RNA.463-201ENST00000384271 102 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 SNORD3H-201ENST00000384486 214 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 BX276092.4-201ENST00000452056 248 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 RN7SL244P-201ENST00000493405 297 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 Y_RNA.708-201ENST00000516950 96 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 TVP23CP2-201ENST00000571473 623 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC022884.2-201ENST00000578535 580 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 MIR4436B2-201ENST00000581415 91 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 MIR4436B1-201ENST00000583272 91 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC009570.1-201ENST00000609599 745 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC011890.2-201ENST00000613393 294 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 AL162373.1-201ENST00000620433 407 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 PNPT1P2-201ENST00000456768 2050 ntBASIC5.49□□□□□ -1.53
CNTN3Q9P232 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTN3Q9P232 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CNTN3Q9P232 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 MTND5P30-201ENST00000452896 1731 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AL049555.1-201ENST00000562834 1933 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 RNU6-890P-201ENST00000384121 107 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 SNORA51.8-201ENST00000384234 132 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 RNU11-4P-201ENST00000391149 133 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 RNU4-65P-201ENST00000410473 140 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 HMGB3P2-201ENST00000411913 584 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 RPL21P24-201ENST00000413752 448 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 AL360081.1-201ENST00000428299 555 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC096644.2-201ENST00000429278 159 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 PSMA2P3-201ENST00000429685 675 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC010655.1-201ENST00000449336 292 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 IGHV5-78-201ENST00000450948 295 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 MTATP8P1-201ENST00000467115 207 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC128713.1-201ENST00000471495 306 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 MTCO3P44-201ENST00000510977 541 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 RNU6-1213P-201ENST00000517075 94 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC090115.3-201ENST00000553218 849 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AL161713.1-201ENST00000555538 145 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 HNRNPCP4-201ENST00000571636 900 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AC067852.4-201ENST00000590314 478 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 PRR13P7-201ENST00000605538 430 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 AL049539.1-201ENST00000611964 459 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms