Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC099654.13-201ENST00000639774 207 ntBASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SLC6A13Q9NSD5 AC073073.2-201ENST00000609827 2578 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 RLIMP1-201ENST00000339626 1680 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MIR19A-201ENST00000384878 82 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL136372.1-201ENST00000403060 228 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 CCNG1P1-201ENST00000406783 885 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL356095.1-201ENST00000417217 199 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MTCO2P34-201ENST00000421994 607 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 BX890604.2-201ENST00000427883 474 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 VN1R108P-201ENST00000431580 830 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL353706.1-201ENST00000436728 494 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MTCO1P19-201ENST00000443487 500 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 USP9YP29-201ENST00000445112 563 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 SNORD42A-201ENST00000459584 64 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC092451.1-201ENST00000480211 153 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 RPS3AP50-201ENST00000487064 803 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 SUMO2P20-201ENST00000520803 283 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 SNRPGP16-201ENST00000533275 226 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL133271.1-201ENST00000538229 291 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC025884.1-201ENST00000556034 378 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC006362.1-201ENST00000567392 174 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MIR3690-201ENST00000580266 75 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 COX6CP3-201ENST00000580869 223 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC007687.1-201ENST00000602704 304 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL137849.1-201ENST00000604767 169 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC012443.1-201ENST00000605605 231 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC011939.3-201ENST00000613686 466 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AL159972.1-201ENST00000625150 448 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 AC010149.2-201ENST00000637608 315 ntBASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A13Q9NSD5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC009812.4-201ENST00000569134 1805 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 SNORA40.3-201ENST00000390964 122 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-754P-201ENST00000391166 107 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 FCF1P10-201ENST00000407590 479 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 RNU4-65P-201ENST00000410473 140 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 HMGN1P24-201ENST00000412282 298 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC090774.1-201ENST00000435925 246 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AL033528.1-201ENST00000453780 140 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC099563.1-201ENST00000456086 418 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 RPL23AP31-201ENST00000456160 467 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 CFTRP1-201ENST00000456646 183 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 PPIAP15-201ENST00000479662 484 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 AC022447.1-201ENST00000515358 464 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 SNORA31.9-201ENST00000516429 84 ntBASIC3.61□□□□□ -1.83
SLC6A13Q9NSD5 IGKV2-23-201ENST00000518729 323 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms